Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2251 ATGAAGTTAGAAGTGGAGGTAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCCAGGACCATCTTCGTCACTACCAACTCTCTTTTCTCGATCAAGTGTCTCCCATGGTGTATAACCCTAtggttcttttttattcttgcgACGGTACCACTCAATTCAACAGAACCACCATTTCCAAAAAGCTGAAGAAATCTTTGTCTGATGTTTTAACCCATTTCTACCCGCTTGCCGGACGAGTCAATGGCAACAGTTTCATAGACTGCAACGACGAAGGCATTCCCTACTTAGAAGCAAAAGTGAAGTGCAAAGTTGTCGACGTTATTCATGAGCCAGATCCGGGAGAACTCAACCATTTGGTTCCATTTCTACTAGATGATATCACCAATATCACATTTGGTGTTCAACTTAATGTTTTTGATTGCGGTGGTATTGCAATCGGAGCTTGCCTTTCTCACCAGATTGCAGATGCTCTCTCATTTTTCACGTTCCTCAATTGTTGGGCAGCCACTGCTAGGGAACAAGCTGTGTCGCCAAATCCACAGTTTATTTCATCTAAGCTCTTCCCACCGAAAAACATATCTGGGTTTGATCCTCGAAGTGGCATCATGAAGGAGAACATCATCTGTAAGATGTTTGAGTTTGACGGTTCtgttgttgaaaattttagagCAAGATATGCAGATACCCAAAGCTTAGAAAATGAGAAGCGCCCTACCCGAGTGGAGGCCTTATCTGCTTTCATTTGGAGTCGTTATGTGGCAGTGACTAGAGAGCAATCTGGTCCACAGAGAACATATGCTGTGATTCACGCAGTGAACCTGCGTCCAAAGATGGAACCACCACTGCCTTCAGATTCCTTTGGTAATTACTACCGAATCACCATGACAATTCCATCGTTGAACACTGGAGAACATGGTCTAGTGAAACAGGTAAGGGATGAGATAAAGAAGATTGACAAGGATTATGTGAGAAAACTCCAAGATGGAAACGAGCATTTGGATTTCCTTAAGGATAGTTTATATAGAGTGCTTATGAAGGGGGAActggtctcatttaatattACTAGTTTGTGTAGGTTTCCTCTGTATGAAGCTGATTTTGGATGGGGAAAACCAACATGGGTAGGTTCACCcgctttaacttttaaaaatctgGTTGTGTTTATAGACACAAAGAATGGTGATGGCATAGAGGCTTATGTTAGCTTAAAGGTGGAGGACATGACGAAGTTCGAAGCAGATGAGGAGTTGCTTGCCTATGTGAATAAAGCACGGGTTTGTTga 1287 0.404 MKLEVEVISKEIIKPSSPTQDHLRHYQLSFLDQVSPMVYNPMVLFYSCDGTTQFNRTTISKKLKKSLSDVLTHFYPLAGRVNGNSFIDCNDEGIPYLEAKVKCKVVDVIHEPDPGELNHLVPFLLDDITNITFGVQLNVFDCGGIAIGACLSHQIADALSFFTFLNCWAATAREQAVSPNPQFISSKLFPPKNISGFDPRSGIMKENIICKMFEFDGSVVENFRARYADTQSLENEKRPTRVEALSAFIWSRYVAVTREQSGPQRTYAVIHAVNLRPKMEPPLPSDSFGNYYRITMTIPSLNTGEHGLVKQVRDEIKKIDKDYVRKLQDGNEHLDFLKDSLYRVLMKGELVSFNITSLCRFPLYEADFGWGKPTWVGSPALTFKNLVVFIDTKNGDGIEAYVSLKVEDMTKFEADEELLAYVNKARVC 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2251 428 PANTHER F21J9.9 2 424 - -
Ssu6g2251 428 Gene3D - 1 196 IPR023213 -
Ssu6g2251 428 Pfam Transferase family 4 418 - -
Ssu6g2251 428 Gene3D - 205 422 IPR023213 -
Ssu6g2251 428 PANTHER ANTHRANILATE N-BENZOYLTRANSFERASE 2 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2251 Ssu-Chr6 50199103 50200389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2251 3 413 Monolignol Biosynthesis Gene Families AT5G48930 26.292 6.42e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2251 K13065 - gmx:102670206 738.028