Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2234 ATGAACATTATCACTAAGGTTTCCCTCAACCAAGGCATGAGCCACTATGTCCTTGTGGTTTATCGCCATGCTTTTGCCACCATTGTCATTGCTGcttttgcctttatttttgaaagGAAAGGTCAACCAAAGATAACATTCCCAATTTTCATGCAAATTTTTATCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTAAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAAAATGCTTCCGGCCATGACTTTTGTCATGGCAGTTTTTTGCCGGATGGAGAAGATAAACATAAAGACGGTGAGATGCATAGCAAAATAG 342 0.3918 MNIITKVSLNQGMSHYVLVVYRHAFATIVIAAFAFIFERKGQPKITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSKMLPAMTFVMAVFCRMEKINIKTVRCIAK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2234 113 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 111 - -
Ssu6g2234 113 PANTHER WAT1-RELATED PROTEIN 1 113 IPR030184 GO:0016021|GO:0022857
Ssu6g2234 113 Pfam EamA-like transporter family 11 108 IPR000620 GO:0016020|GO:0016021
Ssu6g2234 113 PANTHER WAT1-RELATED PROTEIN 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2234 Ssu-Chr6 48439306 48440322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2234 1 113 Nodulin-like Gene Family AT5G07050 77.876 1.78e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2234 - - gmx:100804390 209.92