Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2126 ATGGCTGTTTTTGCATCTTCATCATCTTTGCAAACCCATTTGCATTCTTCATTCTTGGTACCTTCTTTTGAAGGTGCACATGATCACAATTCATTGTGGGTACGAGTGAGATCACAGAAACCCACTGGTCAAAGATTACACGAACAGAACATAACAAGAGGGCTAAAACTAAAAGTACAGAGTGCAGCAACAAAACCAGCAAAATCCCCAGCTGAAGAAGATTGGAAGGTTAAGCGAGAATATCTGCTTCAGAAAAGGGTAAGGAGTGTGGAAGTAAAGGAAGCTCTGCGCCTTCAGAAAGAAAACAACTTTGTGTTACTCGATGTAAGGCCGGAAGCAGAATTTAAAGAGGCACATCCTCCAGGTGCAATCAATGTGCAAGTATATAGACTAATAAAAGAGTGGACAGCATGGGACATTGCCAGACGTGCTGCATTtgcattttttggcatttttgcTGGTACAGAAGAGAACCCTAAGTTCATCCAGAATGTTGAagcaaaaatagataaaagtgcAAAGATAATAGTCGCTTGCACATCAGGGGGTACATTGAGACCATCACAAAATTTGCCAGAAGGTCAACAATCAAGGTCACTTATAGCAGCGTACTTGCTGGTCCTTAACGGTTATACCAATGTCTTTCATCTAGAAGGTGGTCTTTACACATGGTTCAAAGAGGGACTGCCAACTGTTTCAGAGGAAGAAAGCTAG 714 0.3978 MAVFASSSSLQTHLHSSFLVPSFEGAHDHNSLWVRVRSQKPTGQRLHEQNITRGLKLKVQSAATKPAKSPAEEDWKVKREYLLQKRVRSVEVKEALRLQKENNFVLLDVRPEAEFKEAHPPGAINVQVYRLIKEWTAWDIARRAAFAFFGIFAGTEENPKFIQNVEAKIDKSAKIIVACTSGGTLRPSQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYTWFKEGLPTVSEEES 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2126 237 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 85 232 IPR036873 -
Ssu6g2126 237 Gene3D - 74 231 IPR036873 -
Ssu6g2126 237 ProSiteProfiles Rhodanese domain profile. 100 233 IPR001763 -
Ssu6g2126 237 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 4 235 - -
Ssu6g2126 237 CDD RHOD 94 224 - -
Ssu6g2126 237 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 4 235 IPR043186 -
Ssu6g2126 237 Pfam Rhodanese-like domain 92 225 IPR001763 -
Ssu6g2126 237 SMART rhod_4 90 230 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2126 Ssu-Chr6 42100454 42104417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2126 57 236 Sulfurtransferasese or Rhodanese AT4G27700 78.333 1.28e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2126 - - gmx:100792221 418.698