Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2107 ATGATTTTGCTCTCTCAAAAGCTATTTTCTCAATGGCTTCTAGTCATTCTTTGGTGTTCTATCATAGCCACCATCTTTCAACATGTTTCTGCTGTGAGCCTACCAAACAATGAAACTGTGCCAGCAGTGATTGTATTTGGGGACTCTATAGTAGATCCGGGAAACAACAACTATATCATCACACTTGTCAAATGCAATTTCGCACCATATGGTAGAGATTTTGCTGGAGGAAATCATCCAACTGGGAGGTTCAGCAATGGTTTAGTCCCATCAGATATCATTGCTGCAAAATTTGGAGTCAAGAAGTTTTTACCTGCTTATCTTGACCCAAATTTGCAACTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGGTGGTGCTGGATATGATCCTCTAACAGCAGAATTAGCGTCTGTGATGTCTCTGTCAGATCAATTAGACATGTTCAAGGAGTACATAGAGAAGATAAATGAAGCAGTTGGAAGTAACAGATCGGCAACAATAGTGTCTAAGAGCATATACATAGTATGCATAGGAAGTGATGACATTGCCAATACTTACACTCAATCACCATTTAGGCGTAGCAAGTATGATATTCCTTCATACACGGATTTAATGGCTTCAGAAGCCTCAAACTTCTTGCAGAAACTTTATGGACTTGGAGCTAGAAGGATTGGAGTATTTGGTTTACCAGCTATAGGGTGTGTGCCCTCACAAAGAACAATTGGTGGAGGCTTGGATAGAGCATGCTTTGATTCTTCCAACCAAGCAGCAATACTCTTCAACTCGAAGCTCCTCTCCCAAATGGATGCACTTGCCAAAAAGTTTTCAGACGCTAGAATTGTCTATCTTGATTCTTACAACGGATTGCTAAACATGACTCAAAATCCTGCTAAATACGGTTTCGAAGTGACAGAGAGAGGATGCTGTGGCACGGGGAAAATAGAAGTCAGCATTTTGTGCAACCGTTACAGCATAAACACATGCTCTAACTCCTCTAACTACATATTCTGGGACAGTTACCATCCTACTGAGAAGGCTTATAATGTCCTTAGTTCTCTGGTGCttgataacaaaattaaggaCTTCTTCTGA 1098 0.4044 MILLSQKLFSQWLLVILWCSIIATIFQHVSAVSLPNNETVPAVIVFGDSIVDPGNNNYIITLVKCNFAPYGRDFAGGNHPTGRFSNGLVPSDIIAAKFGVKKFLPAYLDPNLQLQDLLTGVSFASGGAGYDPLTAELASVMSLSDQLDMFKEYIEKINEAVGSNRSATIVSKSIYIVCIGSDDIANTYTQSPFRRSKYDIPSYTDLMASEASNFLQKLYGLGARRIGVFGLPAIGCVPSQRTIGGGLDRACFDSSNQAAILFNSKLLSQMDALAKKFSDARIVYLDSYNGLLNMTQNPAKYGFEVTERGCCGTGKIEVSILCNRYSINTCSNSSNYIFWDSYHPTEKAYNVLSSLVLDNKIKDFF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2107 365 PANTHER GDSL ESTERASE/LIPASE EXL3 3 364 - -
Ssu6g2107 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 364 - -
Ssu6g2107 365 Pfam GDSL-like Lipase/Acylhydrolase 43 355 IPR001087 GO:0016788
Ssu6g2107 365 CDD SGNH_plant_lipase_like 41 359 IPR035669 -
Ssu6g2107 365 Gene3D SGNH hydrolase 28 361 IPR036514 -
Ssu6g2107 365 SUPERFAMILY SGNH hydrolase 42 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2107 Ssu-Chr6 40931189 40933447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2107 20 360 Pollen Coat Proteome AT1G75910 38.841 2.85e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2107 - - gmx:102668883 654.44