Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2099 ATGAACTATGGACTTCCTGCTGTTATAGCTTTTGGTGATTCAATCTTGGATACCGGGAACAACAACTATATTGAAACATATATAAAGGCAAGTTTCAAACCGTATAGGAGGGATTTCATTGGAACAAAATCCACAGGAAGGTTTTGCAATGGCAAGATTCCTTCAGACTTTTTTGCTGAAATGCTTGGTATTAAGGAGGCTTTGCCACCCTATCTGGATCCAAATTTGAAGATTGAAGACCTCTTAACTGGGGTGTCTTTTGCCTCTGCCGGTTCAGGATATGATCCTGTTACATTTAAAATAGCTATGGTGTTGTCAGTAGAGGATCAACTACTTATGTTCAAAGAGTACATAGGAAAACTGAAGGAAGCTGTAGGGGAAGAAAGGACAGCTCTCATTCTAGCAAAAAGCATGTTTCTTGTCAGCATGGGAAGCAATGATATTtcagtaacatattttttgtcaCCATTCAGGAAGAATGAGTATGATATTGAAGAGTATACAAATATGCTGGTCAATACGGCTTCCAATTTTCTACTGGAGCTTTATCAACTGGGAGCAAGAAGGATTGGAATAATTGGCTTATCACCAGTAGGATGTGTGCCACTGCAAAGAACAGTACAAGGAGGCGAAGAAAGGAAGTGCGTAGAATCGGTAAACCAGGCAGCCATGGTGTTCAACTCCAAgctttcttcttcaattatgTCTCTCAACAAAGGTCTTCCAGCTTGTAGGCTTGTCTACGTTGAAAACTATAGTGATTTGAGTGGACTTATCCAACAGTACAATGAGTCTGGATTTGAAATGGCGGATGCTGCATGCTGTGGCGTTGCAAATGTGGAATTTGGCTTTCTCTGTAATTTTCTCTCCTTAAAAGTCTGCAGAGATGCCTCTAAATGTGTTCTGGGACGGTTATCACCCGACGGAGAGAACTTACAATATACTTGTTTCGGAGGCTATTAA 963 0.3936 MNYGLPAVIAFGDSILDTGNNNYIETYIKASFKPYRRDFIGTKSTGRFCNGKIPSDFFAEMLGIKEALPPYLDPNLKIEDLLTGVSFASAGSGYDPVTFKIAMVLSVEDQLLMFKEYIGKLKEAVGEERTALILAKSMFLVSMGSNDISVTYFLSPFRKNEYDIEEYTNMLVNTASNFLLELYQLGARRIGIIGLSPVGCVPLQRTVQGGEERKCVESVNQAAMVFNSKLSSSIMSLNKGLPACRLVYVENYSDLSGLIQQYNESGFEMADAACCGVANVEFGFLCNFLSLKVCRDASKCVLGRLSPDGENLQYTCFGGY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2099 320 Pfam GDSL-like Lipase/Acylhydrolase 8 278 IPR001087 GO:0016788
Ssu6g2099 320 CDD SGNH_plant_lipase_like 6 299 IPR035669 -
Ssu6g2099 320 Gene3D SGNH hydrolase 2 302 IPR036514 -
Ssu6g2099 320 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 302 - -
Ssu6g2099 320 PANTHER GDSL ESTERASE/LIPASE EXL3 2 302 - -
Ssu6g2099 320 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 8 19 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2099 Ssu-Chr6 40648503 40650226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2099 1 275 Pollen Coat Proteome AT1G75910 42.143 5.40e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2099 - - gmx:100776321 489.96