Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2094 ATGGGTTCTATTGGAATTGAAAGCTCGGGACCTGAAGTTCTCACCGTTGATGTACTAGCAGCCAAGGGTCTGATCCAGACCAGTCATGTTTATCTGGATGTCAGGACGGTGGAAGAGTTCCAGAAAGGGCATGTGGATGCAGAGAAGATCATTAACATTCCGTACATGTTTAATACGCCAGAAGGCAGGGTGAAGAACCCGGAGTTTCTGAAGGAGGTTTCATCGGCTTGCGAGAAAGAAGATCACATCATCGTGGGCTGTCAAAGTGGAGTGAGATCTCTGTATGCAACTGCTGATCTTCTGACCGAAGGCTTTAAGGATGTGAGCAACATGGGAGGAGGTTATCTGGACTGGGTTAAAAACGAATTTCCAGTGAAAGCACCATTGAACTTGGTTAAAAACGAACTTCCAGTGAAAGCATCTTCGGACTTTGTTAAAAACGAATTTCCAGTGAAAGCACCTTTGGTTGGTTAA 474 0.4515 MGSIGIESSGPEVLTVDVLAAKGLIQTSHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVSSACEKEDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYLDWVKNEFPVKAPLNLVKNELPVKASSDFVKNEFPVKAPLVG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2094 157 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Ssu6g2094 157 CDD RHOD 20 119 - -
Ssu6g2094 157 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Ssu6g2094 157 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 - -
Ssu6g2094 157 Pfam Rhodanese-like domain 27 120 IPR001763 -
Ssu6g2094 157 SMART rhod_4 16 124 IPR001763 -
Ssu6g2094 157 Gene3D - 7 127 IPR036873 -
Ssu6g2094 157 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2094 Ssu-Chr6 40413924 40417246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2094 3 125 Sulfurtransferasese or Rhodanese AT5G66170 57.724 1.90e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2094 - K15692 gmx:100792251 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2198 2 78187078 78189389 Ssu6g2094 6 40413924 40417246 PCT