Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2056 ATGGCCATCAGAAAATCCAATAAGCTACCCCAAACAGATGTTATCAAGCAAATTCTGAGAAGGTGCTCAAGCTTTGGAAAGAAACAAGGCTACAATGAAGAGGGTCTTCCAGAAGACGTGCCAAAAGGCCACTTTGCAGTGTATGTTGGTGAAAACAGGACAAGATATATTGTCCCAATTTCGTGGTTGGCTCACCCACAGTTTCAAAGTCTGCTCCAAAGGGCTGAGGAGGAGTTTGGCTTCAATCATGACATGGGCCTTACCATCCCATGTGATGAAGTTGTTTTTGAGTTTCTTACCTCAATGATTAGATGA 315 0.4317 MAIRKSNKLPQTDVIKQILRRCSSFGKKQGYNEEGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2056 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Ssu6g2056 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Ssu6g2056 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2056 Ssu-Chr6 39126577 39126891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2056 5 103 Calmodulin-binding Proteins AT4G34750 42.424 1.06e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2056 K14488 - gmx:100500218 203.371