Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2036 ATGGACATTGACGGTGGAGTAGAGGAGACCGTAAGAGAGTTGAGGCAATACTTCAAAAGTGGAAAAACCAAAAGTGTGGCATGGAGGAAAAACCAGCTCACAGCTCTCTTAGACCTTGTTCATGAGAATGAAGATGCTATATTTAAGGCCCTGCACCAAGATCTTGGGAAGCACCCCGTTGAGGCTTACCGCGACGAGGTTGGAGGGGTAGAAAAATCAGTCAACAAATCTTTGAACTACGTTGAGAAATGGATGGCCCCTAAAAAGGCAGATTATTCTATTTCCTTTCTGTTactaatttctctcttttcattttatACTGATATCCCTATCCTTTTCTTCCCAGCTAAAGGAGAAGTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCGATCATACTGGCATTGGATCCATTAATTGGAGCAATATCTGCTGGAAATGTTATAGTCATAAAACCTTCAGAGCAAGCTCCAGCATGCTCTTCCTTTCTTGCCAATACCATTCCTCATTACATGGACTCTAATGCCATCAAGGTGATTGAGGGCGGAGCAGATGTCTGTGAACGACTACTGCGACAGAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCGAGCATAGTCATGTCTGCTGCTGCAAAGAATTTAACTCCAGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCCATACTTGATTCCCTTCCCAATCCTTCAGATTTTAAGTTGGCAGTCAAAAGAATTGTAGGAGGAAAGTGGGGACCTTGCAGTGGACAGGCTTGCATAGGAATAGACTATTTGCTTGTTGAGGAGAAGTTCTCATCTGCTCTGATAGAACTACTAAAGAAGATAATCAGAAGATTTTATGGTGAAAACCCAGTGGAGTCAAAGGTAATTTCGAGAATAATAAACAAGCAGCACTTTGAGAGATTATGCAATCTTCTTAAAGACCCTCTTGTTGCGGCTTCCATCGTTCATGGTGGTTCGGTCGATGAAGAAAACCTGTTCATTGAGCCTACAATCTTGTTAGATCCTCCACTAGATTCTCAGATAATGACAGAAGAAATATTTGGCCCACTGCTTCCTATAATCACAattaataaaattcaggGAAGTATTGACTTTATCAATGCAAGGCCAAAACCTCTTGCCATTTATGCCTTCACCAAAGATGAAACATTCAAGAGAAAGATTCTGTCAGAAACATCCTCAGGAAGTGTCGTATTTAATGACACAATGGTTCAATTTTTATGTGATACGCTACCATTTGGAGGTGTTGGCCAGAGTGGTTTTGGAAGGTACCATGGGAAGTACTCCTTTGACACTTTCAGCCATGAAAAAGCTGTAATGCATAGAAACCTGATCCTTGAAATTGAGCCAAGGTACCCTCCTTGGAGTAAGTTCAAGCTAGAGTTTATCAGATTGGCATACAAGCTGAACTACTTTGGACTATTACTTCACATGCTGGGCTTCAAACTGGGCTTGAAAAGATACAACTAG 1521 0.4096 MDIDGGVEETVRELRQYFKSGKTKSVAWRKNQLTALLDLVHENEDAIFKALHQDLGKHPVEAYRDEVGGVEKSVNKSLNYVEKWMAPKKADYSISFLLLISLFSFYTDIPILFFPAKGEVLSEPLGVVLIFSSWNFPIILALDPLIGAISAGNVIVIKPSEQAPACSSFLANTIPHYMDSNAIKVIEGGADVCERLLRQKWDKIFFTGSPRVASIVMSAAAKNLTPVTLELGGKCPAILDSLPNPSDFKLAVKRIVGGKWGPCSGQACIGIDYLLVEEKFSSALIELLKKIIRRFYGENPVESKVISRIINKQHFERLCNLLKDPLVAASIVHGGSVDEENLFIEPTILLDPPLDSQIMTEEIFGPLLPIITINKIQGSIDFINARPKPLAIYAFTKDETFKRKILSETSSGSVVFNDTMVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRNLILEIEPRYPPWSKFKLEFIRLAYKLNYFGLLLHMLGFKLGLKRYN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2036 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 233 436 IPR016163 GO:0016620
Ssu6g2036 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 454 IPR016162 GO:0016491
Ssu6g2036 506 Pfam Aldehyde dehydrogenase family 7 456 IPR015590 GO:0016491
Ssu6g2036 506 PIRSF ALDH 2 497 IPR012394 GO:0006081
Ssu6g2036 506 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 8 499 - -
Ssu6g2036 506 SUPERFAMILY ALDH-like 7 471 IPR016161 GO:0016491
Ssu6g2036 506 PANTHER ALDEHYDE DEHYDROGENASE 8 499 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2036 Ssu-Chr6 38202418 38206520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2036 7 499 Aldehyde Dehydrogenase Gene Family AT4G36250 59.838 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2036 K00128 - gmx:100809812 890.182