Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2035 ATGGAATGGATTATTGGAATATGGGGTTTGATGGGTATCCTTTTATGTTGGTGGTTTCTGTGTGTGAAGGGGGAGAATAGTAATGgggtgaagaagaagaagaaggggaaaGTTCCAAAAGGGAGCACAGGTTGGCCTTTACTTGGAGAGACCCTTGAGTTCATTGCTTGTGGCTACACCTCCAACCCTGTCAGCTTCATGGAAAAGCGCAAGTCCCTGTATGGTAATGTATTTAAGACGAGCATTTTGGGAACTGGTGTGATTGTGTCCACAGACCCGGAAGTGAACAAGGTGATTCTGCAAAACCAGGGGAACATCTTCGTCCCTGCTTATCCAAAATCAGTTAGAGAGCTAATGGGAGAATACTCTATACTCCAAATGAACGGGAACATGCACAGGAAAGTCCATTCACTCCTTGGAGGGTTCCTGCGATCCCCACAATTCAAAGCTCGAATCACTAGAGATATTGAACACTCTGTTAAACAATGCTTTGCAACTTGGACCCACCAACCAATATACGTTCAAGATCAAGTCAAAAAGATTACATTTACTATTTTGGTTAAAGTTCTGCTAAGCATTGGTCCCGGTGAAGATTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAAGGGTTGATTTGCTTACCCCTCAAGTTTCCAGGAACAAGACTATATAAATCCCTGAAGGTTGTCTCCCCCACTCAAAATATAGCTAAGGAAAGAATGATGAAGATTGTGCAGAGGGTAATAGAGGAAAGGAGCAATAATAtcggtaaaaataataataaggattCAGAGAAGGGCGGTGCAGCAAATGATGTGGTGGATGTGCTTTTACGGGATAAGGGTGACAGCAACTCTATCCCTAACATGTTGGAAAATATCTGCGAGAATATCATTGAGATGATGATCCCTGGGGAGGAGACTCTTCCGACGGCTATGACCATGGCTGTTAAGTTTCTCAGTGACCATCCCGTTGCTCTATCCAAATTAGTGGAGGAGAACATAGAATTGAAGAGGCGGAAGAATAGTTCAGACGATTATGCATGGACTGACTACCTGTCACTGCCATTTACTCAAAATGTTATCAGCGAAACTCTAAGAATGGCAAATATTGTCAATGCCATTTGGAGAAAAGCAGTCAAAGACGTGGATATTAAAGGGTACCTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACTTCTGTTCATATGGATGGCATGAATTATGAAAATCCTTTTGAGTTTGATCCAGGGAGATGGGAGAAAATTGGAACGGGGGCTAATAACAATTGCTTTACACCATTCGGTGGTGGACAGAGACTTTGCCCTGGCATAGAACTCTCAAGGCTAGAGCTCTCTATTTTCCTTCACCATCTTGTTACAACTTACAGATGGGTTGCTGAGAAGGATGAAATTATCTACTTTCCAACAGTCAAGATGAAGAGGAAGCTCCCAATCAGTCCTAAAGCCACAAATGTTGAAGTGGAGAATAGCCCAAACATTGCTGCCACTAAACCTAAAGAGTGTCAGATCAAAAGGTGGTTGCTAGGGTGCAAATCTCCCATACTTATTTGGGCGCTCATGGTGTTTGTTGTGCTTGGTTGTGGATGGTGA 1623 0.4147 MEWIIGIWGLMGILLCWWFLCVKGENSNGVKKKKKGKVPKGSTGWPLLGETLEFIACGYTSNPVSFMEKRKSLYGNVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGEYSILQMNGNMHRKVHSLLGGFLRSPQFKARITRDIEHSVKQCFATWTHQPIYVQDQVKKITFTILVKVLLSIGPGEDLDFLKREFEEFIKGLICLPLKFPGTRLYKSLKVVSPTQNIAKERMMKIVQRVIEERSNNIGKNNNKDSEKGGAANDVVDVLLRDKGDSNSIPNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDHPVALSKLVEENIELKRRKNSSDDYAWTDYLSLPFTQNVISETLRMANIVNAIWRKAVKDVDIKGYLIPKDWCVVASLTSVHMDGMNYENPFEFDPGRWEKIGTGANNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISPKATNVEVENSPNIAATKPKECQIKRWLLGCKSPILIWALMVFVVLGCGW 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2035 540 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 SUPERFAMILY Cytochrome P450 34 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 Pfam Cytochrome P450 39 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 Gene3D Cytochrome P450 28 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 6 491 - -
Ssu6g2035 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Ssu6g2035 540 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2035 540 PANTHER CYTOCHROME P450 26 6 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2035 Ssu-Chr6 38083712 38093725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2035 26 467 Cytochrome P450 AT3G13730 50.897 7.87e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2035 K12637 - gmx:100812489 857.055