Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2028 ATGTCAACGGAAGCGCCCAAGCGCGACCAATGGCGGTGGGAGCACGCCACCGCCGGCGCCGCCGCCGGATTCGCCACCGTCGCCGTTATGCAACCCCTCGATGTTGTCCGAACTAGGTTCCAAGTTAACGACGGTCGAGTCTCTCATCTTCCCAGTTACAAGAACACTGCTCACGCCATTTTCACCATTGCTCGCTCCGAGGGATTAAGAGGTTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATTTCATGgggtttatatttctttttCTATGACAAAGCCAAACAAAGATACGCAAGGAACAGGGAGGGGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTGCTTGTGCACAAATCCTGTGTGGCTAGTAAAGACAAGATTGCAGCTTCAAACTCCACTTCATCAGACGCGACCATACTCTGGGATTTATGaTGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCTGGTCTTTTTCTGCAGGTCTCTCATGGCGCTATTCAATTCACAGCATATGAAGAGCTACGTAAAGTTATTGTTGATTTTAAGAGTAAGGGAAGTACAGTACATAATCAAAACCCTGATAAATTGCTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAATTTGCTGCAATACTTCTAACCTATCCATTTCAGGTTATGCGTGCCCGATTGCAGCAACGACCTAGTGGTGATGGGGTTCCAAGATATATGGACACTTGGCATGTTGTGAAAGAAACTGCACGATATGAAGGTGTCCGAGGTTTTTACAAAGGAATTGCCCCAAACCTCTTGAAAAATGCTCCTGCTTCTTCAATaacatttattgtttatgaaaatgttCTAAAATTGCTTAAACTGGCTAGAAGGAATGACTGA 948 0.442 MSTEAPKRDQWRWEHATAGAAAGFATVAVMQPLDVVRTRFQVNDGRVSHLPSYKNTAHAIFTIARSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREGKLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQTPLHQTRPYSGIYDAFRTIMREEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRKVIVDFKSKGSTVHNQNPDKLLNSVDYAVLGATSKFAAILLTYPFQVMRARLQQRPSGDGVPRYMDTWHVVKETARYEGVRGFYKGIAPNLLKNAPASSITFIVYENVLKLLKLARRND 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2028 315 Gene3D Mitochondrial carrier domain 13 308 IPR023395 -
Ssu6g2028 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Ssu6g2028 315 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Ssu6g2028 315 Pfam Mitochondrial carrier protein 221 309 IPR018108 -
Ssu6g2028 315 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Ssu6g2028 315 SUPERFAMILY Mitochondrial carrier 12 303 IPR023395 -
Ssu6g2028 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 307 IPR018108 -
Ssu6g2028 315 PANTHER BNAA09G07970D PROTEIN 10 310 - -
Ssu6g2028 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Ssu6g2028 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 310 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2028 Ssu-Chr6 37667848 37679357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2028 32 308 Chloroplast and Mitochondria Gene Families AT2G47490 38.028 2.05e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2028 K15115 - gmx:100809599 574.318