Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2025 atGGCCAATTCCATGAGCTTTCTCCTGCTTCTTTCTTTACTAACCTTTGCTCCCTTGTGCCTCTGTAACTATAACAAAGAGGGTTACCTCTACCCTCAGTTTTATGACAATTCATGCCCACAAGCTCAGCAAATTGTCAAGTCCGTCCTTGCCAAGTATGTTGCAGTGGAACCCCGATTGGCAGCTTCAATTCTCAGGCTTCATTTCCATGATTGTTTTGTCAAGGGTTGTGATGCTTCATTGTTGCTAGATAGCAGTGAAGAGAGAGAATGCCCTTCTACAGTGTCTTGTGCTGACATCTTGACTCTAGCTGCAAGAGATTCAGTTGTTTTTACCGGTGGACCAAGCTGGGAAGTACCTTTAGGCAGAAGGGACTCTCTAGGTGCAAGCATAAGTGGCTCCAACAACAATATTCCAGCCCCAAACAACACATTCCAGACCATCCTAACTAAATTCAAACATCAGGGGCTCGACCTTGTTGATGTAGTTGCTCTATCTGGGGGACATACTATTGGAAATGCCAGGTGCACCAGCTTCAGGCAAAGGCTCTATAACCAAAGTGGCAACGGCAAGCCAGATTCCACCCTTGACCAATACTATGCTGCTTTATTGCGTAATAGGTGTCCAAGATCTGGGGGTGATCAGAATCTCTTCTTCCTAGACTATGTCACCCCATATAAATTTGACAACAGCTACTTCAAGAACCTGTTGGCTTACAGGGGTCTATTAAGTTCTGATGAAGTCCTCTTCACAATGAACCAAGAATCAGCTGAATTGGTGAAGTTGTATGCGGAAGGAATTGACATTTTCTTTCAACAATTCGCCAAGTCCATGGTCAAGATGGGAAACATATCTCCTTTGACTGGTCCAAGGGGAGAGATCAGAAAGAATTGTCGGAAGATTAACGCTTGA 912 0.4441 MANSMSFLLLLSLLTFAPLCLCNYNKEGYLYPQFYDNSCPQAQQIVKSVLAKYVAVEPRLAASILRLHFHDCFVKGCDASLLLDSSEERECPSTVSCADILTLAARDSVVFTGGPSWEVPLGRRDSLGASISGSNNNIPAPNNTFQTILTKFKHQGLDLVDVVALSGGHTIGNARCTSFRQRLYNQSGNGKPDSTLDQYYAALLRNRCPRSGGDQNLFFLDYVTPYKFDNSYFKNLLAYRGLLSSDEVLFTMNQESAELVKLYAEGIDIFFQQFAKSMVKMGNISPLTGPRGEIRKNCRKINA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2025 303 SUPERFAMILY Heme-dependent peroxidases 30 302 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 ProSitePatterns Peroxidases proximal heme-ligand signature. 161 171 IPR019793 -
Ssu6g2025 303 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Plant peroxidase signature 219 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Plant peroxidase signature 276 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Plant peroxidase signature 235 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 CDD secretory_peroxidase 30 301 IPR033905 GO:0004601|GO:0042744
Ssu6g2025 303 PANTHER PEROXIDASE 72-RELATED 88 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PANTHER PEROXIDASE 72-RELATED 5 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 Gene3D - 30 87 - -
Ssu6g2025 303 Pfam Peroxidase 88 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Haem peroxidase superfamily signature 161 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Haem peroxidase superfamily signature 113 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PRINTS Haem peroxidase superfamily signature 95 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Ssu6g2025 303 Gene3D Peroxidase, domain 2 139 282 - -
Ssu6g2025 303 ProSiteProfiles Plant heme peroxidase family profile. 29 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu6g2025 303 PANTHER PEROXIDASE 88 302 - -
Ssu6g2025 303 PANTHER PEROXIDASE 5 87 - -
Ssu6g2025 303 Gene3D - 88 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2025 Ssu-Chr6 37641038 37643003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2025 1 302 Peroxidase AT5G66390 68.468 1.10e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2025 K00430 - gmx:100777733 535.028