Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2017 atgTTGAATCTGTCGAGAGAAGAGGTACTATTGGTAGTGCAGAACTATTACGACATAATCGTGGTCGCATTATTCTCTATAGGAGTAACATATTTCGCTTCAAAAGCTTGGAAAAGAGCTACAAACAATAGAGAAGATATCCCTGGCCGGCTGGGATTACCTTTTATTGGggaaactttttcttttctttcagcCACTAATAGTACAAGAGGATGCTATGATTTTGTCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAAGACAAGGCTATTCGGGAAGATCCACATATTTGTTCCTAATCCTGAAGGTGCAAGGACCGTATTTGCTAATGACTTTGTGCTATTCAACAAGGGTTATGTAAAGTCGATGGCAGATGCCGTGGGAGAGAAAAGCTTGTTATGTGTACCCGTTGAGAGCCACAAAAGAATAAGGCGTCTTCTATCCGAACCATTTTCAATGACTTCCCTGTCTGCATTTGTCACCAAATTTGACAAAATGTTGTGTGGAAGGCTGCAAAAGCTAGAAGAAAGCGGGAAAAGTTTCACGGTGTTGGACTTCTGTATGAAGATGACATTTGATGCAATGTGTGATATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATCGAGAAAGACTGCACTGCCGTCTCTGATGCCATGTTATCCATTCCTATCATGATTCCTGGTACCAGATACTATAAAGGCATCACGGCTCGTAAAAGGCTCATGGAGACCTTCAGAGAGATTATTGCCGGACGTAGGCGGGGAGAAGAGTCTCCAGAGGACTTCCTTCAGTTCATGTTGCAGCGAGACTTACTCCCAGCCAGTGAAAAGCTTGATGACTCGGAGATTACAGATAATCTGTTGACATTAATAATTGCTGGACAAACCACCACAGCAGCAGCGATGATGTGGAGTGTAAAGTTTCTACATGACAACAGAGAAGCACAGGACGTACTCAGGGAAGAACAGTTATCTATAACCAAAATGAAGCCAGACGGAGCTTCAATTAACCATGAAGATCTCAACAACATGCGTTATGGTTCGAAGGTAGTTAAGGAAACATTGAGAATGTCCAATGTCCTGCTATGGTTTCCTCGTGTTGCACTTCAAGACTGCACGATTGAAGGGTATGATATAAAGAAAGGTTGGCACGTTAACATCGATGCTACTTATATCCATCACGACTCCGATCTGCACAAGGATCCGTTGAAATTCAACCCACAAAGATTTGATGAAATGCAAAAACCGTACAGTTTCATACCTTTTGGATCGGGGCCTAGGACATGCCTTGGGATCAATATGGCGAAAGTGACAATGTTGGTCTTTTTACACAGAATCACTGGTGGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCTAGGCTAAGGAGTGGCTGCCCAATAACTTTGAAGTCCTTAAGCAAAAGCATGCCGGAGGCATAA 1479 0.4233 MLNLSREEVLLVVQNYYDIIVVALFSIGVTYFASKAWKRATNNREDIPGRLGLPFIGETFSFLSATNSTRGCYDFVRLRRLWNGRWFKTRLFGKIHIFVPNPEGARTVFANDFVLFNKGYVKSMADAVGEKSLLCVPVESHKRIRRLLSEPFSMTSLSAFVTKFDKMLCGRLQKLEESGKSFTVLDFCMKMTFDAMCDMLMSITEDSLLRQIEKDCTAVSDAMLSIPIMIPGTRYYKGITARKRLMETFREIIAGRRRGEESPEDFLQFMLQRDLLPASEKLDDSEITDNLLTLIIAGQTTTAAAMMWSVKFLHDNREAQDVLREEQLSITKMKPDGASINHEDLNNMRYGSKVVKETLRMSNVLLWFPRVALQDCTIEGYDIKKGWHVNIDATYIHHDSDLHKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGINMAKVTMLVFLHRITGGYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSLSKSMPEA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2017 492 SUPERFAMILY Cytochrome P450 46 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PANTHER CYTOCHROME P450 26 20 485 - -
Ssu6g2017 492 Gene3D Cytochrome P450 36 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Ssu6g2017 492 Pfam Cytochrome P450 52 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g2017 492 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2017 Ssu-Chr6 37346210 37350728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2017 48 457 Cytochrome P450 AT1G19630 46.377 5.19e-125 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2017 - - gmx:100789430 922.539