Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1949 ATGGAAGTACTTCCTTGTTCTGGTGTTCAGCATGCTGGGGCATCTGATTGCTCTCAGCCAAATTCAGGAGCAACTTTTATAAACCAGGGAGAACCTAATTGCCCTGAAAGTGGTGATCAGACTAAATTggaagatgatcgtctgaataACTCATTACAAACAGAAGGGCCTCAGATAGAAAGACAAGGTCAAATGCAACAGACTGTTCCTGAACTCTTGACTAATATAGATTGCCAATGTGGTGGAGCTTCATGTTGTTACTGTCAAGTGGAAGGCCTGAAGGAATCCTATAGTTTCCATGGTGTTGTAGATGATGAAATAAATGAACCTAGCTTGGCCTTTGAAAACTCTGTCTCTATTGCAGATACAATTGAAAGTGAATCACCAAATGATAGTAGGGAATTAGAGTTGTCATTTTCTGAACCTACTTGGCTGAAGGGAGATGTGCCTGTGGGATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGTATCAAATGTGCAAGGGCTGACTGGCCGTTATCAACTTTAAAAGCAAAACCAACTCATGACCGGAAGaaatattttgtcatattttttcctCACACAAGGAATTATTCTTGGGCTGATATGCTGCTTGTGCGATCAACTGATGAGTTTCCCCAGCCTATCGCATACAAAACTCATCAAACAGGATTGACAATGGTAAAAGATTTGACTGTTGCACGGCGGTTTATAATGCAAAAGCTAGCCATTGGTGTACTGAGCATTATTGATCAGCTTCATCCTAATGCCTTGCTAGAAACTGCTCGTGATGTGATGGTTTGGAAGGAATTTGCTATGGAGACTTCTCATTGTAACAGTTATTCAGATTTTGGAAGAATGCTTCTAAAGCTACAAAATAGCATAGTGAAGCACTACACAAATGCTGACTGGATACAACATTCATCTTACTCTTGGGCTGAACGATGCCAGAATGCAAATAGTGCTGAATCAGTAGAGCTACTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAACGATGTCAACACTCCCTGTGATGCACTGGAGCGATCAACATTTGGTTCTGAGTGGAAAACCTGGAAGCATGATGTGATACAATGGTTTTCCACATCACCTTCCTTTTCTAGCAGCAAGGATATGCAGCAAATGACCTCTGATGGGTTGTACCAAGTAAGCCTTCAGGTTGGTAGAAAAAGGCCCAAGCTTGAAGTTCGTCGTGCAGATATGCATGCTTCACTGGTGGAAACCAACGGTTTAGATCACCCAATTACTCTTGAAACTGACCCAGGTTTCTATAGGAATCAGGAGACATTGAGTGCATTAGCAGCTGAGACTTCTATACACAAAGATGTTAGGGAGGGTACCTGTGGCAACTGA 1380 0.413 MEVLPCSGVQHAGASDCSQPNSGATFINQGEPNCPESGDQTKLEDDRLNNSLQTEGPQIERQGQMQQTVPELLTNIDCQCGGASCCYCQVEGLKESYSFHGVVDDEINEPSLAFENSVSIADTIESESPNDSRELELSFSEPTWLKGDVPVGLWVKWRGKWQAGIKCARADWPLSTLKAKPTHDRKKYFVIFFPHTRNYSWADMLLVRSTDEFPQPIAYKTHQTGLTMVKDLTVARRFIMQKLAIGVLSIIDQLHPNALLETARDVMVWKEFAMETSHCNSYSDFGRMLLKLQNSIVKHYTNADWIQHSSYSWAERCQNANSAESVELLKEELFDSILWNDVNTPCDALERSTFGSEWKTWKHDVIQWFSTSPSFSSSKDMQQMTSDGLYQVSLQVGRKRPKLEVRRADMHASLVETNGLDHPITLETDPGFYRNQETLSALAAETSIHKDVREGTCGN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1949 459 MobiDBLite consensus disorder prediction 1 43 - -
Ssu6g1949 459 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 451 - -
Ssu6g1949 459 MobiDBLite consensus disorder prediction 12 36 - -
Ssu6g1949 459 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1949 Ssu-Chr6 35154741 35160166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1949 108 409 C2H2 Transcription Factor Family AT2G23740 51.485 5.59e-103 333