Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1911 ATGTTGTCGCTTGAGACAGCACGTCATGAAAGTAATGCTCCTCCTGTCAATGTTCATCCATTGCCTTTGCCTCTTCGGGATACCTTGCCTTCACCTCCTACTGCCAATCCCTTTTCCCCTGTCGTGGCTAAGTCAGAATTGTTGCCAATGAAAAGCCAATGGCAAAAAGGGAAACTTATTGGGCGTGGCATGTTTGGAAGTGTTTATGTTGCAACCAATAGGGACATCAAAGGGGCCAACTTGCTTGTTGACTCTGCTAGTGGTGTTAAGCTTGCTGACTTTGGGATGGCTAAGCATATGAGTTCTAAGTCCCCCtctctttga 324 0.4568 MLSLETARHESNAPPVNVHPLPLPLRDTLPSPPTANPFSPVVAKSELLPMKSQWQKGKLIGRGMFGSVYVATNRDIKGANLLVDSASGVKLADFGMAKHMSSKSPSL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1911 107 MobiDBLite consensus disorder prediction 1 37 - -
Ssu6g1911 107 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 74 105 - -
Ssu6g1911 107 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 5 73 - -
Ssu6g1911 107 MobiDBLite consensus disorder prediction 17 37 - -
Ssu6g1911 107 SUPERFAMILY Protein kinase-like (PK-like) 46 103 IPR011009 -
Ssu6g1911 107 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 74 105 - -
Ssu6g1911 107 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 5 73 - -
Ssu6g1911 107 Gene3D Transferase(Phosphotransferase) domain 1 73 106 - -
Ssu6g1911 107 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1911 Ssu-Chr6 33481439 33484179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1911 16 73 MAP Kinase Kinase Kinase AT5G66850 59.322 3.05e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu6g1911 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1911 - - gmx:100796935 105.531