Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1910 ATGGAAATGGATAATAGCCCTAATCTTGCTTTTGCTGTTGATATTTGGAGTTTAGGTTGTACCATGATTGAAATGTTCACAAGGAAGCCTCCTTGGAGTCAGTATGAAGGAGTTGCAGCTCTGTTTAAGGTTATAAAGGAAACCCCTACTATACCTGAAACATTGTCTCCCAAGGGTAAAGATTTCTTGAGGATAAACCACGTCGTCTTAATggacaatctaaaaaaatatgatcaGCTGTCTACCTCATGTGCAAATATTGCAAAGGGGAAAGCAACTGAGAGGCGAGGATTTCTCATTCCTTTCGTTAGATATTCTTCCACCATATTGGGACCAATAACGTAA 345 0.3739 MEMDNSPNLAFAVDIWSLGCTMIEMFTRKPPWSQYEGVAALFKVIKETPTIPETLSPKGKDFLRINHVVLMDNLKKYDQLSTSCANIAKGKATERRGFLIPFVRYSSTILGPIT 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1910 114 SUPERFAMILY Protein kinase-like (PK-like) 9 65 IPR011009 -
Ssu6g1910 114 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 65 - -
Ssu6g1910 114 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1910 114 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 65 - -
Ssu6g1910 114 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1910 Ssu-Chr6 33479963 33480859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1910 1 65 MAP Kinase Kinase Kinase AT5G66850 69.231 3.53e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu6g1910 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1910 - - gmx:100796935 134.035