Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1890 ATGGAGATGGCTCAGGTGGTGAAGACAAGAGCTCGAACTGCATTGGCCATGGGAGCTGCCGCAACTTCACCGAAGAGAAGAAAAATCGCCACCACGGCCAACAACAACACTAACACTGGCACAGACCTAAAATCCTCACTCAAGAGTTTGAGTAATACAACCGCGCCGGCGACGGAGGAACGCTGCTCAGGTGAATCTCCGGCGTCTTGTTGTTCCGGCAACGGATCCTTCGATGAAAACCGAATCATCGAATTCTCAGATCTGGAGGTAGAGAGTGCGCAAGTTGAAACGTCGACGTGCAACTGCGGTGAACGACAAATAAGGAGAGAGATGAGTCTCTCGAGCGAGCTTCGAATTACGAATTCGCAAGAGGTGGATTCAGCGCAGAATAAGCCAATAATGCAGACCAAATCTCGCTGCGTTTTATCCACGCCGCAGAAAATGCCAACGGAGTCGGAGCTCGAAGACTTCTTCGCTGCCGCCGAGAAAGATATTCAGAAACGCTTCTCAGACAaATATAATTATGATATTGTGAAGGATGTGCCCTTGGAAGGTCGTTACGAGTGGGCTAAATTAAAGCCATAA 585 0.4923 MEMAQVVKTRARTALAMGAAATSPKRRKIATTANNNTNTGTDLKSSLKSLSNTTAPATEERCSGESPASCCSGNGSFDENRIIEFSDLEVESAQVETSTCNCGERQIRREMSLSSELRITNSQEVDSAQNKPIMQTKSRCVLSTPQKMPTESELEDFFAAAEKDIQKRFSDKYNYDIVKDVPLEGRYEWAKLKP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1890 194 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 6 194 IPR044275 GO:0004861|GO:0045736|GO:0051726
Ssu6g1890 194 MobiDBLite consensus disorder prediction 17 70 - -
Ssu6g1890 194 Gene3D p27 122 194 IPR044898 -
Ssu6g1890 194 MobiDBLite consensus disorder prediction 27 70 - -
Ssu6g1890 194 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 6 194 - -
Ssu6g1890 194 Pfam Cyclin-dependent kinase inhibitor 148 192 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1890 Ssu-Chr6 32996826 32997913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1890 83 194 Core Cell Cycle Gene Families AT1G49620 43.363 5.79e-21 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2480 2 83485303 83486533 Ssu6g1890 6 32996826 32997913 PCT