Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1869 ATGCAGGGTTGCTTAAGGGCGTTGGACACTGCTAACAAAGGCACTGCGAAAGTGGATAAGAAGAATGGGTCGACCCAGTTGCAGGTCCTACAATTTGGGCAACACTTTGCCGGTGCCGAGATGGCTGTCACAAAGGAAGAGGAACAGCAAACCCAACTTGTCGGCCACAAAGATCTCGCTCACAAGAGTCTCCTTCAGAGCGATGCACTCTACCAGTATATTCTTGAAACCAGTGTACATCCAAGAGAGCACAAAAGCCTGAAGGAGCTCAGAGAGATGACAGAAAAACACCCAAGGCAAGATCATACAGACGAAGGACAGCTTTTGAGCATGCTTCTTAAGCTCATGAATGCCAAGAACACCATGGAAATTGGAGTATACACTGGTTACTCTCTGCTCTCCACTGCCCTGGCTCTTCCCCATGATGGAAAGATCTTGGCTATGGACGTGAACCGTGAATACTATGAGTTGGGATTGCCCGTAATTCAAAATGCTGGAGTGGCTCACAAGATTGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGATGAGTTGCTTCAAGATGAAAATAACAAGGGAACCTTCGATTTCATTTTTGTGGACGCTGATAAGGATAACTACTTGAACTATCACAAGAGGGTGATTGACCTTGTGAAGATTGGGGGATTGATCGGGTACGATAACACCCTATGGTGTGGATCTGTGGTGGCCCCACCCGATGCGCCTCTGATGGATTACGTCCAGCGTCATCGCGGTCATGTGATTGAGCTCAACAAGTATCTGGCTCAAGATTCTAGGATTGAGATTTGCCAGCTCCCTGTGGGTGATGGGATTACCCTATGCCGCCGCATTATCTAA 858 0.4779 MQGCLRALDTANKGTAKVDKKNGSTQLQVLQFGQHFAGAEMAVTKEEEQQTQLVGHKDLAHKSLLQSDALYQYILETSVHPREHKSLKELREMTEKHPRQDHTDEGQLLSMLLKLMNAKNTMEIGVYTGYSLLSTALALPHDGKILAMDVNREYYELGLPVIQNAGVAHKIDFREGPALPLLDELLQDENNKGTFDFIFVDADKDNYLNYHKRVIDLVKIGGLIGYDNTLWCGSVVAPPDAPLMDYVQRHRGHVIELNKYLAQDSRIEICQLPVGDGITLCRRII 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1869 285 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 42 285 - -
Ssu6g1869 285 CDD AdoMet_MTases 123 224 - -
Ssu6g1869 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 283 IPR029063 -
Ssu6g1869 285 PANTHER O-METHYLTRANSFERASE-RELATED 42 285 - -
Ssu6g1869 285 Gene3D Vaccinia Virus protein VP39 52 285 IPR029063 -
Ssu6g1869 285 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 63 284 IPR002935 GO:0008171
Ssu6g1869 285 Pfam O-methyltransferase 76 284 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1869 Ssu-Chr6 32345212 32349672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1869 46 284 Monolignol Biosynthesis Gene Families AT4G34050 75.207 5.22e-135 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1869 K00588 - gmx:100799303 409.838