Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1857 ATGGATACGTCGGAGAATTGCTCTGTCAAAGTCGCTCTTCACATTCGTCCTCTCATTGCCGATGAACGACAACAAGGTTGCATTGAATGCGTTTCCTTTACGCCTGGGAAGCCTCAGGTTCAAATTGGGTCACATTCCTTTACATTTGATTATGTTTATGGAAAGGGTGGATCTCTTTCAGTTGACATGTTTGAGGAATGCGTTGCTCCATTGGTTGATGGCTTATTCCAAGGTTACAATGCTACTGTACTTGCTTATGGTCAGACAGGATCTGGGAAAACGTATACCATGGGAACCGGCTATAATGACAATTGTCGGACTGGATTAATTCCTCAGGTTATGGGTGCCTTGTTCAACAAGATTGAAACACTAAAGCATCAAACAGAATTTCAGTTGCATGTTTCCTTCATTGAGattttgaaGGAAGAGGTGAGGGACTTGTTGGATACGGTATCTATGGGCAAATCAGAAACCTCCAACTCTAATGGTCATTCTGGGAAAGTAACTGTTCCTGGGAAGTCACCAATACAAATTCGTGAAACATCAAATGGAGTAATAACACTGGCAGGAACAACTGAAGTTGCTGTAAGTACACTACAGGAGATGTCTGCTTACTTGGAGCAGGGTTCTTTAAGCAGGGCAACTGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATTTTCACAATTACATTAGAACAGATGCGCAAACTCCATTCTGTTTCTCCCACCAACGACTCTTCAGACGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCAAAAAGAACAGGTTCTGATGGTCTTCGTTTGAAAGAAGGAATACACATCAATAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCGCTGGGGGATGAGAAAAAGCGAAAGGAGGGTGTGCATGTTCCTTATCGGGATAGCAAACTCACTCGACTCTTACAGGATTCGCTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCTGATGTCAATGCCGAGGAAACTCTCAATACGCTCAAGTATGCAAACCGTGCTCGCAATATTCAAAATAAGCCTGTCGTTAATCGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTGAAGTACTTGCAGGCTGAACTCTGTTCTCGGGGAGGAGCTCCTGCTGATGAAGTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCAACTAATGAAGACCTCTACAGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGAGAGATGTGAAATTGATGAACCAgATGGACACATTTATCTCATGCAAACTGATGGGCTTGAGAGGCGCTTTCAGAGCTTAGATTCATCTGACCATCCCATGATTGGAAGTATATCGGGTGAGGATTCTAGGGAAACTGATGAAGCAGCAAAAGAGTTGGAGCATGTATTATTACAAAATACCATGGATAAAGAGATGAATGAGTTGAATAAGCGCTTGGAGCAGAAAGagTCTGAGATGAAGCTCATTGGAGTTGATACTGAAACACTCAAACAGCACTTTGGGAAGAAGATTATGGAACTTGaggaggagaaaagaaaagtgcaGGAAGAGAGGGACCGTTTATTGCACGAGGTAGAGAATCTTACTGCTAATTCAGATGGGCTAGCACACAGAACTCAAGATGTTCGTGGCCAAAAGTTGAAAGCATTGGAAGGACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCAGGTGCAGCTATTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAAATACAGTATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAGGAGCTACTCCAGTTGAAAAAGGAGGGAAGAAAAAATGAGTACGAAAGACATAAGCTTGAGGCTCTAAACCAGCGTCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACGAAAAGGCTAAAAGAATTGTTGGAAGCCCGCAAATCTTCTCCCCGTGACAACTCTGTTTATTCAAATGGACATCTACAGCCTGGGCTGGTCAATGAAAAATCCCTCCAAAGGTGGCTTGATCAGGAGCTGGAGGTCATGGTACACGTGCATGGAGTTCGTGCTGAATATGACAAACAAAATCAAGTccAAGCTGCACTGGAAGAAGAGCTGGCTTTACTAAAACAGGATCAGTTTTCAGATGGGCAGAGTATTCCCACAGGAAAGAGCAGATATTTGAGGCTGTTATCCATGTCACCAGATACAAAAGTTAAGAGAATAGCTTCTCTGGAGAACATGCTGTCCATGTCTTCAGTTGCTTTGAAAAACATGGCTTCACAACTTACTGAGGCAGAAGAAAGGGAACGAATGTTAAATAACCGTGGTCGTTGGAACCAGCTACGCTCGATGGGAGATGCCAAGAATGTGCTTCATTATTTGTTCAACGCTACAGCTGAAGCAAGGTGCCAATTGTGGGAAAAAAATATGGAACTTAAGGATTTGAAAGAGCAACTAAATGAGCTTGTAGCACTACTACAACAAAGTGAAGCACAGAGAAAAGAACTTGTGAAGGAGCAAAAAATAAGGGAACAAGCTCTTGCCATCACATTGAATACACCGGCATTGGAAAACTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCATTGTCTCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCCCTGGAGTTGTTAATTGGTCAGTCAGGGAGTCAGCTACATTTTTAGATGAAGCACGAAAGATGATACCCATTGGAGAGTTGTCAACAAAGAGTCTAGCAGCTATAGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAATGATGAGACAATAATGAGGTCAAGGCCTCGAGCACAAGCTTTGATTAATGTGATGTGA 3093 0.4252 MDTSENCSVKVALHIRPLIADERQQGCIECVSFTPGKPQVQIGSHSFTFDYVYGKGGSLSVDMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYNDNCRTGLIPQVMGALFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDTVSMGKSETSNSNGHSGKVTVPGKSPIQIRETSNGVITLAGTTEVAVSTLQEMSAYLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQMRQQLKYLQAELCSRGGAPADEVRVLKERIAWLEATNEDLYRELHEYRSRCAFVERCEIDEPDGHIYLMQTDGLERRFQSLDSSDHPMIGSISGEDSRETDEAAKELEHVLLQNTMDKEMNELNKRLEQKESEMKLIGVDTETLKQHFGKKIMELEEEKRKVQEERDRLLHEVENLTANSDGLAHRTQDVRGQKLKALEGQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNQRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLQPGLVNEKSLQRWLDQELEVMVHVHGVRAEYDKQNQVQAALEEELALLKQDQFSDGQSIPTGKSRYLRLLSMSPDTKVKRIASLENMLSMSSVALKNMASQLTEAEERERMLNNRGRWNQLRSMGDAKNVLHYLFNATAEARCQLWEKNMELKDLKEQLNELVALLQQSEAQRKELVKEQKIREQALAITLNTPALENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNWSVRESATFLDEARKMIPIGELSTKSLAAIGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHNDETIMRSRPRAQALINVM 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1857 1030 Coils Coil 375 395 - -
Ssu6g1857 1030 PANTHER KINESIN-LIKE PROTEIN KIN-4B 1 1029 - -
Ssu6g1857 1030 CDD KISc_KIF4 7 368 - -
Ssu6g1857 1030 Coils Coil 677 697 - -
Ssu6g1857 1030 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1857 1030 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1857 1030 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1857 1030 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1857 1030 Coils Coil 808 828 - -
Ssu6g1857 1030 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1857 1030 MobiDBLite consensus disorder prediction 154 174 - -
Ssu6g1857 1030 Coils Coil 744 764 - -
Ssu6g1857 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Ssu6g1857 1030 Coils Coil 858 892 - -
Ssu6g1857 1030 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ssu6g1857 1030 Coils Coil 497 524 - -
Ssu6g1857 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1029 - -
Ssu6g1857 1030 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu6g1857 1030 Coils Coil 589 630 - -
Ssu6g1857 1030 Gene3D Kinesin motor domain 1 395 IPR036961 -
Ssu6g1857 1030 Coils Coil 529 563 - -
Ssu6g1857 1030 MobiDBLite consensus disorder prediction 154 168 - -
Ssu6g1857 1030 Coils Coil 407 434 - -
Ssu6g1857 1030 Pfam Kinesin motor domain 37 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1857 Ssu-Chr6 32063194 32073999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1857 9 400 Calmodulin-binding Proteins AT5G65930 35.101 1.03e-55 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1857 - - gsj:114393858 1865.89