Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1776 ATGGGCGTATGCAGTTATTGGAAGCCACCCTTGTCTCTGAAAAGCCATGGAGAAAATTGGCTTTCACGTATGGTCAACTCTGGTCAAAGCGTGGGAACTGTAGGGCTTGGTTGCATCTCTGGCTCCAGGTTAGAGATGAGAAAAAAGACACAGTCCGTGGTCAAATGCTTTGGGTGTGACCGAAGTAGTGGTGAAGAGGACGGCGTGGCGGTGGGATCAGATGAAGAGTTTGTGAAGGTTCTCCGAGAAGTCCAGCCTTACATGTCTGTGCATAGCAACAGATTATTTGTTCTTGTCTTGTCTGCAGAAGTTGTTGCTAGTCCTTGTTTGGATGTCACTCTCAAGGATATAGCCTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTCCCGGGGACTCATGTGCAAATTGACAATGTTTTGCGTGAGAGAGGGAGCCAGCCTAAGTATGTTGGTACATATAGGATAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGCAGAATAAGGTTGATGATTGAAGCCAAGCTTTCTCCTGGACCTTCCATTTACAATATTCGTCGACATGGTGATAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCCAGTGGGAACTTCCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAATTGATTATGGGTCAACTGGGGAGGTTAAAAAAGTAGATGTTTCTCGCATGCGTGAGAGGCTTGATGGCGGttgtattgttattttaagCAACCTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATACCTACGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTTATATGCGTTATAGATGGTCCGATACTGGACGAAAGTGGACACCTTATTAGTTTCTTGACTCTTCAAGAGGCAGACATGCTAATTCGTAAACGGGTTGAGCAAAGTGAAATAGCTGCTAACTATGTGAAAGCTGTTGATGAAGAAAGTTTCAACTCTCTTGggtttaactattttaatgggGCAGTCCATTCTCCACTGAATGGAAAACCATTTTCAGAATCTCATCATGCAACCTTTCATAATGGTGTTGGTTTTGACAATGGGAATGGCCTATGGTCTGGGGAGCAAGGTTTTGCTATTGGAGGTCAGGAGTGGCTAAGTCGAATGAATGGTTACCTGTCAGAACTGGCTGCTGCTGCCTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATAAGTGGAGTTCTATTGCTAGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGAGTCTGGCATATTAGTTAAGCGGACTGATGAAGAGCTGCTCCAATCGTTAAGCTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGcactttttcctttctttgagGAGAAGTGTGGTGAGGTTGCTGCAATTGCAGTATCTCCTGATTGTAGGGGTCAAGGACAGGGTGACAAATTACTTGATTATATAGAGAAGAAGGCGTCATCTCTTGGATTTGAAATGCTTTTCTTGCTTACAACTCGTACAGCAGATTGGTTTGTAAGGCGTGGATTTTCAGAATGTTCAATTGATTCTATACctgagaagaaaaggaaaacgaTTAATCTATCCCGCAAGTCTAAGTATTACATGAAGAAGCTTCTACCCAATAAGAGTGGAATTACTGTTGGTAGCAAATTTACTTCCGGTTAG 1818 0.4241 MGVCSYWKPPLSLKSHGENWLSRMVNSGQSVGTVGLGCISGSRLEMRKKTQSVVKCFGCDRSSGEEDGVAVGSDEEFVKVLREVQPYMSVHSNRLFVLVLSAEVVASPCLDVTLKDIAFLHHLGIRFVLVPGTHVQIDNVLRERGSQPKYVGTYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDYGSTGEVKKVDVSRMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDGPILDESGHLISFLTLQEADMLIRKRVEQSEIAANYVKAVDEESFNSLGFNYFNGAVHSPLNGKPFSESHHATFHNGVGFDNGNGLWSGEQGFAIGGQEWLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLIQPLEESGILVKRTDEELLQSLSSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSLGFEMLFLLTTRTADWFVRRGFSECSIDSIPEKKRKTINLSRKSKYYMKKLLPNKSGITVGSKFTSG 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1776 605 CDD AAK_NAGS-ABP 76 437 IPR033719 -
Ssu6g1776 605 Pfam Amino acid kinase family 110 308 IPR001048 -
Ssu6g1776 605 CDD NAT_SF 484 546 - -
Ssu6g1776 605 PANTHER AMINO-ACID ACETYLTRANSFERASE NAGS2, CHLOROPLASTIC-RELATED 64 599 - -
Ssu6g1776 605 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 398 589 IPR010167 GO:0004042|GO:0005737|GO:0006526
Ssu6g1776 605 Gene3D - 75 442 IPR036393 -
Ssu6g1776 605 Gene3D - 443 589 - -
Ssu6g1776 605 Pfam Acetyltransferase (GNAT) family 482 548 IPR000182 GO:0016407
Ssu6g1776 605 PANTHER AMINO-ACID ACETYLTRANSFERASE 64 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Ssu6g1776 605 SUPERFAMILY Carbamate kinase-like 75 312 IPR036393 -
Ssu6g1776 605 Hamap Amino-acid acetyltransferase [argA]. 73 589 IPR010167 GO:0004042|GO:0005737|GO:0006526
Ssu6g1776 605 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 443 591 IPR000182 GO:0016407
Ssu6g1776 605 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 446 593 IPR016181 -
Ssu6g1776 605 SUPERFAMILY Carbamate kinase-like 391 439 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1776 Ssu-Chr6 30354329 30374822 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu6g1776 AA_kinase 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1776 K14682 - gmx:100800925 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2586 2 85195834 85204744 Ssu6g1776 6 30354329 30374822 PCT