Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu6g1738 | ATGGCTGGTTTGGATTTAGGAAGCGCTTCCCGCTTTGTTCAAAACCTTCAGAGACCGGACTTGCACTTGCAACAGCAGCAGCACCACCGCGATTCGGAGGAGCAAGAGACGCCGCCGAACCGCGGAACGGCGCCGTTCGAGGATGATGACCGAAGCCAAGGTCTGGAGCTAGCTTCGGCGGGTCCCGGCGACGTGGTCGGGCGTCGTCCACGTGGCAGGCCTCCGGGGTCGAAGAACAAGCAGAAGCCGCCGGTGATAATCACGCGAGAGAGCGCGAACACGCTGAGGGCGCATATTCTCGAAGTCGGAAGCGGCTCCGACGTCTTCGACTGCGTCACCACCTACGCGCGGCGGCGCCAGCGCGGGATCTGTATTCTCAGCGGCAGCGGCACCGTCACCAATGTCAGTCTCCGGCAGCCGGCGGCGGCGGGCGCGGTCGTCACCTTGCACGGGCGGTTCGAGATTCTGTCGCTGTCGGGGTCGTTCCTGCCTCCGCCGGCGCCGCCGGGGGCGACGAGTCTGACGATATACCTTGCCGGCGGGCAGGGACAGGTGGTCGGAGGGAGCGTGGTGGGGGAGCTGACGGCTGCGGGGCCGGTGATTGTGATCGCGGCGTCGTTCACGAACGTGGCTTACGAGAGGCTGCCGTTGGAGGAGGAGGAACAGCTTCAGATTCAGCCACCCGCTACGACGTCGTCTCAGGGCATGGGGAATAGCAATAATAACCCTTTCCCTGACCCTTCTTCGGGGCTTCCCTTCTTCAATTTGCCGCTTAATATGCAGAATGTTCAGTTGCCCGTGGATGGTTGGGCGGGAAACGCAGCCTCACGTCCACCACCTTTTTGA | 846 | 0.63 | MAGLDLGSASRFVQNLQRPDLHLQQQQHHRDSEEQETPPNRGTAPFEDDDRSQGLELASAGPGDVVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVGSGSDVFDCVTTYARRRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQLQIQPPATTSSQGMGNSNNNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNAASRPPPF | 281 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu6g1738 | 281 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 | 1 | 279 | - | - | |
Ssu6g1738 | 281 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 92 | 227 | - | - | |
Ssu6g1738 | 281 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Ssu6g1738 | 281 | MobiDBLite | consensus disorder prediction | 228 | 249 | - | - | |
Ssu6g1738 | 281 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 96 | 209 | IPR005175 | - | |
Ssu6g1738 | 281 | MobiDBLite | consensus disorder prediction | 23 | 54 | - | - | |
Ssu6g1738 | 281 | Gene3D | - | 95 | 230 | - | - | |
Ssu6g1738 | 281 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 1 | 279 | IPR014476 | GO:0003680 | |
Ssu6g1738 | 281 | CDD | DUF296 | 96 | 179 | IPR005175 | - | |
Ssu6g1738 | 281 | ProSiteProfiles | PPC domain profile profile. | 92 | 228 | IPR005175 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu6g1738 | Ssu-Chr6 | 29318384 | 29319229 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu6g1738 | 1 | 279 | AT-hook Motif Nuclear Localized (AHL) Family | AT4G17800 | 67.327 | 3.00e-103 | 301 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu6g1738 | - | - | pvu:PHAVU_003G230600g | 455.677 |