Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1732 ATGGCTGCTTCATCTGGCGTGGCTGAGCAGGAGACACAGATGTTTTCCGGCAAAAGTGTCCATCCCAGGTTGGATGTCTACGTGTGGGACATGGATGAGACCCTTGTACTGCTCAACTCCTTGCTGAAATCATCGTATGCCGAGGCTTTCAACGGTCTGAAGGATATGCAGAAAGGGATAGAAATTGGGAGGACGTGGGAAAATCTCATTCTACAAATATGTGATGATTATTTCTTCTATGAACAAATTGAAAATTACAACAAACCAATTCTTGATGCTCTGGCCCAATATGATGATGGGAGGGACCTATCTGATTATGACTTCGACCAAGATGAATTAGGTTCTCCACATGATGATGCCAACAAAAGAAAACTTGCATATAGGCATCGAATCATTGCCCAAAAGTACTTACAGGGTTTACAGAATATTTTAGATCACAAGACAATAAAACTCTGGGATGAATTGTATGATAAAACTGATGAATACACTGACAGGTGGCTTTCATCAGCACGGACCTTTCTGAAGGAGTGTTCGGGTGAAGATAAAGATGCAGTTTCTTCTATTGCTTTTGCTAACAGTAGCTCTAACTCAACTAAAGCAAGGTATCAGCGTATAAACTGTTTTAGTGACATCTGGATCGTTAATTCCCTCCCTTGTGAAATGCATGCTCTTTCGTCTGGACAACTTAATAACGCATGGAAATGTTTATAG 711 0.4093 MAASSGVAEQETQMFSGKSVHPRLDVYVWDMDETLVLLNSLLKSSYAEAFNGLKDMQKGIEIGRTWENLILQICDDYFFYEQIENYNKPILDALAQYDDGRDLSDYDFDQDELGSPHDDANKRKLAYRHRIIAQKYLQGLQNILDHKTIKLWDELYDKTDEYTDRWLSSARTFLKECSGEDKDAVSSIAFANSSSNSTKARYQRINCFSDIWIVNSLPCEMHALSSGQLNNAWKCL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1732 236 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 12 202 - -
Ssu6g1732 236 TIGRFAM EYA-cons_domain: EYA conserved domain 25 194 IPR006545 GO:0007275
Ssu6g1732 236 Gene3D - 25 235 IPR038102 -
Ssu6g1732 236 PANTHER EYES ABSENT 12 202 IPR028472 GO:0004725
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1732 24 188 Protein tyrosine phosphatase (PTP) family AT2G35320 61.078 5.00e-72 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1732 - - gmx:100791661 381.333