Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1625 atgacGATGGTGGGGGTGATGAATGGAGGAATGATGGAAGACATAGCAATAGTTGGAGGGTTGATAGGGGTGCAATTTGTTTACGCAGCGAATGCGGTGCTGCTGAGTTATCTCATGTCTTTGGGCCTCCAATCTCTTACCCTTGTCATTTTTACTTCCTTTGCTACGTTCCTTATTCTCCTCCCCCTTGCCTTCTATTATGAAAGGTGTAAATGGCCCACGAAAGTTAGTTTCAAGTTGCTTATACAGCTTCTCTTGCTTTCATTAGGAGGGGTAACATTGTTCCAGTCTCTATTCCTTAAAGGAATCAATTTAACCTCGCCGGCAATGGGAACTGCCATGCCAAACCTTGCACCAGGTCTCATCTTCATCATAGCATGGATTTTTCGGTTGGAAAAAGTCAACTTGAGCTGCACATATAGTAGAGTAAAAATCATTGGCACACTGCTTTGTGTCCTAGGGGCTCTCACAATGAGCATAATGCAAAGCATCTCTACACCTACGTCCGCTAAAGAGGGAACCATTCAATCATCATCTCCACCACCAAATGTAACGTTTGACAGACACAAATTAATCGGTTGTCTCTATCTCTTGGCCGCAGTCCTCATATTGTCAAGCAACATTGTCCTACAGGCCTTTACTCTAGCAGATTTTCCTGCACCGATGTCCTTGTGTGCATTAACTTCCTTTTTTGGGACGTTCATAACTGCTACAGTTCAATTAGTTGAAGATCACGAATTCAAAACTGGATGGCCACCCGTGAGTGTTGGAGATATGATTGGCTATTCTCTTCTGGGAGGTGCGTTGAGTGGAATATGCTTGAGCTTCAATGGTTGGGCACTTGAGAAGAGAGGGCCAGTGTTGGTCTCCATGTTCAGCCCTGTTGGCACAGTCTGCTCGGTCATTTTCTCGGTTGTTACTCTAGGAGAAACCATTAATATTGGAAGCTTTGCGGGTATGTTCCTCATGTTCACTGGGCTCTATTTTGTGCTTTGGGCCAAAGGGAAAGAAGGCTATGCAAAAGGAGGTGGCTTAGAGAGTGAGTATGGTGCAGAGAAGCCTCTCTTAAGTTGA 1074 0.446 MTMVGVMNGGMMEDIAIVGGLIGVQFVYAANAVLLSYLMSLGLQSLTLVIFTSFATFLILLPLAFYYERCKWPTKVSFKLLIQLLLLSLGGVTLFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWIFRLEKVNLSCTYSRVKIIGTLLCVLGALTMSIMQSISTPTSAKEGTIQSSSPPPNVTFDRHKLIGCLYLLAAVLILSSNIVLQAFTLADFPAPMSLCALTSFFGTFITATVQLVEDHEFKTGWPPVSVGDMIGYSLLGGALSGICLSFNGWALEKRGPVLVSMFSPVGTVCSVIFSVVTLGETINIGSFAGMFLMFTGLYFVLWAKGKEGYAKGGGLESEYGAEKPLLS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1625 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Ssu6g1625 357 PANTHER WAT1-RELATED PROTEIN 14 357 IPR030184 GO:0016021|GO:0022857
Ssu6g1625 357 PANTHER OS11G0588100 PROTEIN 14 357 - -
Ssu6g1625 357 Pfam EamA-like transporter family 22 159 IPR000620 GO:0016020|GO:0016021
Ssu6g1625 357 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1625 Ssu-Chr6 27033551 27036702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1625 7 348 Nodulin-like Gene Family AT5G47470 57.726 2.86e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1625 - - gmx:100809182 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2743 2 87905511 87908084 Ssu6g1625 6 27033551 27036702 PCT