Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1594 ATGGCGAGTGGATGGGTGAAGTCATGGCAGTGCAAGTCAAGAGCGTTCGAAGATGTGTACCATCCACGCCCCAAAATCCTGAGTACCGGCTGCAGAAAAAGCGTCGAAAGCATCAAAGGCATGGTCGACATACCCAAGCCCAAGCCCAAGCCCAGAAAGCCCAAGCCTAAGCCGCCTTTGGAGAAACATCCAAGCTCGAAATACCCATCAACCACCAAGCCCGATTTCGAAGCGCGAACCACCATGACCCGTTCGCGAAGCAGCACTACCACGACCACGACAACCTCGTCTCGTGCCATCATTGAACTTCCCGAGGGTCACCCTTCCCGCAACGTCGTCGAGATCATCTTCCACACCAGCTGGGGGCCCAAGCCCTTCCCGGGCCGGGTCGAGGTGATTTTCAAGGTCCAGAACGGCCCACGGACCGTGTCGCGGTTCGAGGAGTTTCGCGAGGCGGTGAAGGGACGCGCCGCCGCGGGGCTCGCCGAGGGGAACGACTGGGAGGAGAACTCGCGGTGCATCGCCGACGGGAACGAGGTGATGCGGTTTCACTGCTTGGGGCCCGCCGAGGACGGTGGGCCCTACGACGGTGGCCGTGCATGGTCGTTTCCGGAGCGGAAGGGGTCGGCCATCTGCACGTTTTCCGGCAGCGGCGGCGCGCATGAGACCGCCGGCGGAGGCAGGGGTAGGAGGGCTATGCTGGTTTGCCGGGTCGTAGCGGGTCGGGTCTCGAAGCAACTCGGGTTTTTGGACTCGTTGTTGAACAAGCGAGTGGGGTTCGACTCGGTGAGTGGGGATAACAGCGAGTTGTTGGTGTTTGACTCGCGCGCGGTATTGCCCtgctttcttattatttacaggttgtaa 867 0.5975 MASGWVKSWQCKSRAFEDVYHPRPKILSTGCRKSVESIKGMVDIPKPKPKPRKPKPKPPLEKHPSSKYPSTTKPDFEARTTMTRSRSSTTTTTTTSSRAIIELPEGHPSRNVVEIIFHTSWGPKPFPGRVEVIFKVQNGPRTVSRFEEFREAVKGRAAAGLAEGNDWEENSRCIADGNEVMRFHCLGPAEDGGPYDGGRAWSFPERKGSAICTFSGSGGAHETAGGGRGRRAMLVCRVVAGRVSKQLGFLDSLLNKRVGFDSVSGDNSELLVFDSRAVLPCFLIIYRL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1594 288 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 287 - -
Ssu6g1594 288 MobiDBLite consensus disorder prediction 27 98 - -
Ssu6g1594 288 MobiDBLite consensus disorder prediction 65 98 - -
Ssu6g1594 288 Gene3D - 98 287 - -
Ssu6g1594 288 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 287 - -
Ssu6g1594 288 SUPERFAMILY ADP-ribosylation 100 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1594 Ssu-Chr6 26386717 26387583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1594 99 286 C2H2 Transcription Factor Family AT2G29660 37.004 2.58e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1594 - - gmx:100792099 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1594 6 26386717 26387583 Ssu6g1594 6 26386717 26387583 ECH