Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1593 ATGTCGGCTTACAGAGACGAGGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGTGTTGTCCCTAATTTCCCCAAACCTGGTATTATGTTCCAGGACATTACTACTCTGTTGCTCGATCCCAAAGCCTTTAAGGACACGATAGATTTGTTCGTGGAGCGATACAAAGGCAAAAATATTTCTGTTGTTGCAgGAATTGAAGCTCGGGGTTTCATTTTTGGTTCTCCCATTGCACTGGCAATAGGAGCCAAGTTTGTACCATTGAGGAAACCGAAAAAATTGCCTGGCAAAGTTATTTCACAAGAGTATATTCTGGAATATGGAAGAGACTGTCTTGAGATGCATGTTGGAGCTGTTGAACGTGGTGAGCGTGCTTTAGTAGTTGATGATTTGATTGCGACTGGTGGAACAGTCTGTGCAGCTATGGACTTAATAGAGCGAGTGGGAGCAGAGGTAGTGGAGTGTGCATGTGTGATCGAATTACCAGAACTGAAGGGCCGTGAACGGTTGAACGGGAAGCCCTTGCATGTGTTAGTGGAATGTTTTGAGTGCTGTCAGTAG 561 0.4474 MSAYRDEDPRLHGIKTKIRVVPNFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGSPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVERGERALVVDDLIATGGTVCAAMDLIERVGAEVVECACVIELPELKGRERLNGKPLHVLVECFECCQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1593 186 CDD PRTases_typeI 48 180 IPR000836 -
Ssu6g1593 186 TIGRFAM apt: adenine phosphoribosyltransferase 14 179 IPR005764 GO:0003999|GO:0005737|GO:0006168
Ssu6g1593 186 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Ssu6g1593 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 180 - -
Ssu6g1593 186 Gene3D - 2 181 IPR029057 -
Ssu6g1593 186 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Ssu6g1593 186 SUPERFAMILY PRTase-like 13 179 IPR029057 -
Ssu6g1593 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1593 Ssu-Chr6 26364299 26380342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1593 1 181 PRT Gene Family AT1G27450 72.928 2.17e-94 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1593 K00759 - gmx:100790431 366.311