Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1549 ATGGACGCTATATGGACCCGAATGGCGGAGGCTGAGGAAAGTGTGCGTGCTGAAGATGCTGAGCAGCACCACCCTGGATTCCGTGTACGATCTCCGCCGCAACGAGATGTGCAAAATGGTGGCGTATTTGTATGGTTGAGCGGGGTGTCCGGTGAATGTAGGGGAACTGGTGTTTCTGACGGTGCTGAATGTGGTAACAAATATGATGTGGGGCGAGGCGGTGGAAGTGGTCGAGAGGGAAAGATTGGGGGCGGAGTTCAGGGAGTTGGTGGCGGAGCTGATGCAGCTTCTACGAAAGGCCAACGTGTTGGATTTTTTCCCGGGCTGGCCCAGTTTGATTTGCAAGGTGTGGAGAAACAGATGCACGTGTTAGTGTTCAAGTTGGATGGGATATTTGGAAGGATGATTGGTCAGCGAATGAAGACGGAAGGGGGAGAGGGCAAgaggaaagaaaggaaagacTTTATGCAATTTTTGTTGAACTTGAAGGAGGAAGACCGTGATTCCAAGACGCTACCAACCATCACCCACGTTAAGGCACTGCTCATGGATATGGTTGCCTGGGGAACTGACACATCTTCTAACATAATTGAGTTTGCAATAGCAGAAATGATGCACAAGCCAAAGGTAATGAAGAGAGTCCAAGAGGAGTTGGAAGCTGTAGTTAGGAAAGATAACATGGTAGAAGAGTTCCAGATTCATAAGTTATCCTACTTGCAAGTTGTGATGAAATAA 735 0.4735 MDAIWTRMAEAEESVRAEDAEQHHPGFRVRSPPQRDVQNGGVFVWLSGVSGECRGTGVSDGAECGNKYDVGRGGGSGREGKIGGGVQGVGGGADAASTKGQRVGFFPGLAQFDLQGVEKQMHVLVFKLDGIFGRMIGQRMKTEGGEGKRKERKDFMQFLLNLKEEDRDSKTLPTITHVKALLMDMVAWGTDTSSNIIEFAIAEMMHKPKVMKRVQEELEAVVRKDNMVEEFQIHKLSYLQVVMK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1549 244 SUPERFAMILY Cytochrome P450 101 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1549 244 MobiDBLite consensus disorder prediction 12 33 - -
Ssu6g1549 244 PRINTS E-class P450 group I signature 197 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1549 244 PRINTS E-class P450 group I signature 177 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1549 244 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 104 244 - -
Ssu6g1549 244 Gene3D Cytochrome P450 88 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1549 244 PANTHER OS08G0547900 PROTEIN 104 244 - -
Ssu6g1549 244 MobiDBLite consensus disorder prediction 12 30 - -
Ssu6g1549 244 Pfam Cytochrome P450 100 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1549 Ssu-Chr6 25448684 25453293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1549 105 244 Cytochrome P450 AT4G12320 50.000 2.27e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1549 - - gmx:100787507 202.216