Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1548 ATGGCTCTCCAGTCAACTTTCTTTCAAAACCTGTTAACCACCGAGTATTGGTACAATCATAGCACAACCATAGTTCTAGCATTCTTGGTCATTTCCGCGGTTACTTGGTACGCATGGCTCAAACCCAAGGCCCAAAGGCTACCCCCGGGTCCACCGGGCCTCCCTTTCGTCGGGAACCTTCTATCCTTGGACCCGGACCTCCACACTTACTTCGCCGGCTTGGCCCAGATCCATGGCCCAATTTTCAAGCTCCGACTCGGGAGCAAGCTCGGCATCGTCTTAACGTCACCCGCCATGGCTCGTGAGGTGCTCAAAGACCACGACACCGTTTTCGCGAACCGCGACGTTCCCGCCGCCGGCAGGGTTGCAACCTACGGCGGATTCGACATAGTATGGACCCCGTACGGCCCCGAATGGCGGATGCTGAGGAAAGTGTGCGTGCTCAAGATGCTGAGCAACGCCACCCTGGATTCCGTGTACGATCTCCGCCGCAAGGAGGTGCGCAAAACGGTGGCGTATTTGTACGATCGAGTGGGGAGTCCGGTGAATGTGGGGGAACAGGTGTTTCTGACGGTGCTGAATGTGATAACGAATATGATGTGGGGCGGGGCGGTGGAAGGGGCGGAGAGGGAACGTTTGGGGGCGGAGTTCAGGGAGATGGTGGCAGAGATGACGCAGCTTCTGGGGAAGCCCAACGTGTCGGACTTTTTTCCCGGGTTGGCCCGGTTCGATTTGCAAGGTGTGGAGAAACAGATGCACGCGTTGGTGCCCCGGTTCGATGGGATATTTGAAAGGATGATTGGTCAACGAAGGAAGGCGgaaggagaagaggagaagGAGACAGAGAAGAAAGATTTTCTGcactttttgttgaatttaaagGAGGAAGGCGGTGATTCCAAGACGCCGCTAACCATCACCCACGTTAAGGCTCTCCTCATGGATATGGTTGTCGGTGGATCTGACACATCTTCCAACACAATTGAGTTTGCAATGGCAGAAATGATGCACAAACCAGAGGTATTGAAGAGAGTCCAAGAGGAGTTAGAAGTTGTGGTTGGGAAAGATAACATGGTAGAAGAGTCACACATTCATAAGTTGTCTTACTTGCAAGCTGTGATGAAAGAAACTCTTCGATTGCATCCTGTGCTTCCACTTCTAGTCCCTCATTGCCCTAGTGAAACCACTATTGTAGGAGGCTACACAATCCCAAAGGGGTCTCGGGTGTTCATGAATGTGTGGTCTATTCATAGAGACCCTTCAATTTGGGAGAAACCACTTGAATTCGATCCTACAAGGTTCTTAGATGCAAAATGGGATTTTAGTGGCAATGACTTCAATTATTTCCCCTTTGGATCTGGAAGAAGAATTTGTGCAGGAGTGGCAATGGCTGAGAGGacgattttgtattttcttgcCATTCTTATGCACTTATTTGATTGGACAATACCACAAGGAGAAAAGTTAGATGTATCAGAGAAATTTGGTATTgttctcaaaaagaaaataccttTGGTTGCCATCCCCATCCCACGATTGTCCAATCCAGATCTTTATAAAtag 1563 0.4798 MALQSTFFQNLLTTEYWYNHSTTIVLAFLVISAVTWYAWLKPKAQRLPPGPPGLPFVGNLLSLDPDLHTYFAGLAQIHGPIFKLRLGSKLGIVLTSPAMAREVLKDHDTVFANRDVPAAGRVATYGGFDIVWTPYGPEWRMLRKVCVLKMLSNATLDSVYDLRRKEVRKTVAYLYDRVGSPVNVGEQVFLTVLNVITNMMWGGAVEGAERERLGAEFREMVAEMTQLLGKPNVSDFFPGLARFDLQGVEKQMHALVPRFDGIFERMIGQRRKAEGEEEKETEKKDFLHFLLNLKEEGGDSKTPLTITHVKALLMDMVVGGSDTSSNTIEFAMAEMMHKPEVLKRVQEELEVVVGKDNMVEESHIHKLSYLQAVMKETLRLHPVLPLLVPHCPSETTIVGGYTIPKGSRVFMNVWSIHRDPSIWEKPLEFDPTRFLDAKWDFSGNDFNYFPFGSGRRICAGVAMAERTILYFLAILMHLFDWTIPQGEKLDVSEKFGIVLKKKIPLVAIPIPRLSNPDLYK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1548 520 Gene3D Cytochrome P450 37 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 12 520 - -
Ssu6g1548 520 PANTHER OS08G0547900 PROTEIN 12 520 - -
Ssu6g1548 520 SUPERFAMILY Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 Pfam Cytochrome P450 48 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1548 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1548 Ssu-Chr6 25426055 25429970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1548 19 519 Cytochrome P450 AT4G12300 61.905 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1548 - - gmx:100783085 886.715