Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1541 ATGACTTCTACAGACTCgatcaattttgaaaacaaactCATTGTTGATGAAGCACTTCACCCTGCAGATCTCTTTGCCACAGGTTCTGGTCACGTGAATCCATCGAGAGCAAATGACCACGGGTTAGTTTATGATATCGAACCTGATGATTATATACCTTATCTGTGTGGTCTAGGCTACGACGATACAGAAGTTGGGATCATTGCACATAGAACTATTAAGTGCTCTGAGAATTCAAGCACTCCCGAACGAGAGCTCAACTATCCCTCATTTTCTGTTGTGCTTGGTTCCCAGCAGACATTCACAAGGACTGTGACAAATGTGGGCGAGGCCAACTCATCTTATGTTGTCATGGTTACGGCACCAGAAGGGTTTGATGTGAAGGTCCAACCAaataaactttactttttagAAGCGAACCAGAAAAAGACATATTCAGTGAAATTCAGCCGTATAGAGTCGGGTAATGAACCTGCGGAATATGCTCAAGGGTTTTTACAATGGGTCTCTGCCAAACACACTGTAAGGAGCCCTATCTTGGTCAAATTTAAGACGATAAAGTCAGCAAGCACCTAG 576 0.4149 MTSTDSINFENKLIVDEALHPADLFATGSGHVNPSRANDHGLVYDIEPDDYIPYLCGLGYDDTEVGIIAHRTIKCSENSSTPERELNYPSFSVVLGSQQTFTRTVTNVGEANSSYVVMVTAPEGFDVKVQPNKLYFLEANQKKTYSVKFSRIESGNEPAEYAQGFLQWVSAKHTVRSPILVKFKTIKSAST 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1541 191 Gene3D Peptidase S8/S53 domain 16 51 IPR036852 GO:0004252|GO:0006508
Ssu6g1541 191 PANTHER SERINE PROTEINASE 1, PUTATIVE-RELATED 1 181 - -
Ssu6g1541 191 Pfam Fibronectin type-III domain 85 181 IPR041469 -
Ssu6g1541 191 Gene3D - 55 184 - -
Ssu6g1541 191 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 181 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1541 Ssu-Chr6 25308755 25309330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1541 1 185 Subtilisin-like Serine Gene Family AT1G04110 42.784 1.90e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1541 - - gmx:100812208 316.62