Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1446 ATGGGGGTAATCGGATTCAACATTGTCGGCAGCAGACAGCAGATTAGTGGGAAGGATGTCATCATGGAGCAGATGGGACAGAGGCCGACTCCATCTCTGGTGGTTTCATCCGCAGAAGTGGCCAGGGAAATTGTGAAAACTCATGACCAAGCTTTTTCGGACCGAGCCCAAAGCACTGCTGCGAAAATCTTCTTTTATGAATGCACAGCAATTGGGTTTGGACGCTACGGAGAAGACTGGagacagaaaagaaaaatatgcgTCCAGCAATTTTTAAGCTCGAAAATGGTGGAATCATTTCGTGTCATCAGAGGAGAAGAAGTTGCAGAGTTGGTGAATAAGTTACGTGAAGTAAGCTCCAGTGATGCACGCAACGTGAATCTAAAGGAGATGTTTATGTCAACCCCGATGAATATGGTGTATAAGGGTGTTTTCGGACGGAAATATTCCGAACATAATTACAGCAAGGTGAAAGAGTCAGTGAGGAAAGTTATGGTTCATCTTGGAGCTTTCACCCTGAGGGATCACTTCCCTttgttgggttgggttgatgTTCTCACCGGAAAAATTCGGGAATACAAGGCCACTTTTGAAGTGTTGGATGCTGCGTTGGATCATGAAATCACAGAGCAATTGACAGCGAAGACGCACTCCGAAAAGAAAGACTTCGTTGATGTCCTCCTCCAACATCAAGAGGATAGCAAGCAGAACTTTGAGCTCAccaaaaataacatcaaaggaATTATACTGACAATATCTAGTGTGAAACTGAAAGGATATGACATTCCTGCAAAAACAGTGGTATATACCAATGCATGGGCAATTCAAAGGGATCCTGAATATTGGGAAAGCCCTGAGGAGTTCCTGCCAGAGAGATTTGAAAATagtcaatttgattttaaaggTCAAGAAGACTTTCAGTTTATTCCATTTGGTTTTGGGAGAAGAGGATGTCCTGGAATGAATTTTGCAATGGCTGCTATTGAGAATATTCTTGCTAGCCTTCTTTATTGGTTTGATTGGAAGTTGCCTGAAAATGATGCACAAGATATAGATATGAGCGAGACATTCGCATTTGTTACCTCAAAGAAAGTGCCACTTGACCTTAAACCAAAAACCTTTTCATTTTAA 1131 0.397 MGVIGFNIVGSRQQISGKDVIMEQMGQRPTPSLVVSSAEVAREIVKTHDQAFSDRAQSTAAKIFFYECTAIGFGRYGEDWRQKRKICVQQFLSSKMVESFRVIRGEEVAELVNKLREVSSSDARNVNLKEMFMSTPMNMVYKGVFGRKYSEHNYSKVKESVRKVMVHLGAFTLRDHFPLLGWVDVLTGKIREYKATFEVLDAALDHEITEQLTAKTHSEKKDFVDVLLQHQEDSKQNFELTKNNIKGIILTISSVKLKGYDIPAKTVVYTNAWAIQRDPEYWESPEEFLPERFENSQFDFKGQEDFQFIPFGFGRRGCPGMNFAMAAIENILASLLYWFDWKLPENDAQDIDMSETFAFVTSKKVPLDLKPKTFSF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1446 376 SUPERFAMILY Cytochrome P450 29 371 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 Gene3D Cytochrome P450 13 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 19 250 - -
Ssu6g1446 376 PANTHER CYTOCHROME P450 71B11-RELATED 19 250 - -
Ssu6g1446 376 PANTHER CYTOCHROME P450 71B11-RELATED 251 375 - -
Ssu6g1446 376 Gene3D Cytochrome P450 253 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 PRINTS E-class P450 group I signature 308 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 PRINTS E-class P450 group I signature 318 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 PRINTS E-class P450 group I signature 271 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 Pfam Cytochrome P450 253 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 Pfam Cytochrome P450 27 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1446 376 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 311 320 IPR017972 GO:0005506|GO:0016705
Ssu6g1446 376 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 251 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1446 Ssu-Chr6 23640066 23643488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1446 30 367 Cytochrome P450 AT3G48320 32.048 2.47e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1446 - K20617 gmx:100781362 278.1