Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1443 ATGTTGTTGCAGTTGGGACAGAGGCAGAATCCAACTGTGGTGGTTTCATCCGTAGATGTGGCCATGGAAATAATGAAAACACATGACGTGGCCGTGGCCTTTTCGAGCCGACCCCAAAACACTGCTGCAAAAATCTTACTATATGGGTGTATTGACATTGCGTTTGGACTCTATGGGGAAAGTTGGagtcagaaaaagaaaatatgtgtcCATGAACTTCTGACCCCGAAAAGGGCTCAATCATTTCATCTCATCAGAGAAGAAGAAGTTGCCAAGTTGGTGAATAAGCTACGCGAAGTGAGCGCCAGTGATGAGTGCCGCGTGAATCTAAAGGAGATGTTCATGTCAACATCAAACGACATCGTATGTAAAAGTGCTTTCGGAAGGAAATACGCGGGAGATGGTTACAGCAGGGTGAAAGAGTTAGCAAGGAATGTTATGGTTCAGCTTGCAGCTTTCACTGTGAGAGATTACTTCCCTttgttgggttgggttgatgCTCTCACTGGAAAAATTCAGGAGTTCAAGGCTACTTTACACGCACTGGACTCTTTATTTGATCAAGCAATTGCGGAGCACTTGACAGTGAAGACGGAAGCTGACCTCTCCAAAAAGAAAGACTTTGTGGATATCCTCCTGCAACTTCAAGAGAATAACAGCATGCTTAATTTTGAGCTCACCAAAAATGACCTCAAAGCACTTCTAATGgtatcACAACCATGCGAGCCAAATTCAGCCATCTACTTATCTGTGCTTTGCTTCTTGATCAGCGTCGCGTTTGTCGTGTTTAAGTTCACAAGAAGAAGCAAATCGAACACACCTCCATCCCCACCAAAGCTACCCTTTATCGGCAATCTTCATCAGCTAGGCACGTTGCCGCACCGTTCCTTCCAAGCCCTCTCTCACAAGTATGGCCCTCTCATGTTGCTGCAGCTGGGGCAAGTCCCAACACTCGTGGTTTCATCTGCGGACGTGGCCAGAGAAATATTCAAAACCCACGATGCCGTTTTCTCGAACCGGCCCAAGGCCACGGCTGCCGAAGTCTTTCTCTACGGTTACAAGGACGTGGGTTTTGCCCCCTACGGCGACGAGTGGAAACAGAAAAGGAAGGTTTGTGTTCTTGAGCTTGTGAGCATGAAAAGCGTGAGATCGTTTCAGTTCATCCGCGTTGAAGAAGTGGCAGAAATGATCGGTGTGATACGCGAAGCGTGTGCAAGTAAGAAGTCCTCTGTGAATCTGAGTGAGTTATTGATCGCACTCACGAACAACATAATGTCTAGGTGTGTTCTTGGACAAAAGTATGACACACCCGATGGTAGTAGAAGCTTTGGAGAGCTTGGAAGGAAGCTGTTGAATCAGTTTACTGCTTTCTGTGTGGGAGATTTCTTCCCTTCGTTGGGTTGGGTTGATGTTCTAACGGGCcaaattccaaggtttaaggcCACTCTTCGTTCGTTAGATATTTTCTTTGATCACGTAATTGCAGAACACAAGACTAAGATGAAGAAGAGGGATGATGACCAATCCGGTAAGAAAGACTTCGTGGATATACTCCTTCAACTTGAAGAGACTGGTATGCTCGGCTTTGAGCTTTCCCAAGATAACCTCAAAGCGTTGCTAGTGAGGAACCCTGAATTTTGGGACAGACCGGATGAGTTCCTTCCACATAGATTCGAAAACAGCCACGTAGATTTCAAAGGACAAGATTTGGAGTTTATCCCGTTTGGTGCTGGAAGAAGGGGATGCCCTGGAATTACATTTGGGGTCACTGTAGCTGAGTATGCTCTTGCTAATCTTTTGTATTGGTTCGATTGGAAGCTGCCTAAAACTGATGCACCAGTGCAAGGCATAGACATGAGCGAGAGATACGGGATCACTGTCAACAAGAAGGTTCCACTTCTCCTTGAGCCAATACCATATCACGCTAGAATAGTCTCTTGA 1941 0.4456 MLLQLGQRQNPTVVVSSVDVAMEIMKTHDVAVAFSSRPQNTAAKILLYGCIDIAFGLYGESWSQKKKICVHELLTPKRAQSFHLIREEEVAKLVNKLREVSASDECRVNLKEMFMSTSNDIVCKSAFGRKYAGDGYSRVKELARNVMVQLAAFTVRDYFPLLGWVDALTGKIQEFKATLHALDSLFDQAIAEHLTVKTEADLSKKKDFVDILLQLQENNSMLNFELTKNDLKALLMVSQPCEPNSAIYLSVLCFLISVAFVVFKFTRRSKSNTPPSPPKLPFIGNLHQLGTLPHRSFQALSHKYGPLMLLQLGQVPTLVVSSADVAREIFKTHDAVFSNRPKATAAEVFLYGYKDVGFAPYGDEWKQKRKVCVLELVSMKSVRSFQFIRVEEVAEMIGVIREACASKKSSVNLSELLIALTNNIMSRCVLGQKYDTPDGSRSFGELGRKLLNQFTAFCVGDFFPSLGWVDVLTGQIPRFKATLRSLDIFFDHVIAEHKTKMKKRDDDQSGKKDFVDILLQLEETGMLGFELSQDNLKALLVRNPEFWDRPDEFLPHRFENSHVDFKGQDLEFIPFGAGRRGCPGITFGVTVAEYALANLLYWFDWKLPKTDAPVQGIDMSERYGITVNKKVPLLLEPIPYHARIVS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1443 646 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 541 640 - -
Ssu6g1443 646 SUPERFAMILY Cytochrome P450 267 638 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 575 584 IPR017972 GO:0005506|GO:0016705
Ssu6g1443 646 PANTHER CYTOCHROME P450 71B11-RELATED 1 236 - -
Ssu6g1443 646 PRINTS E-class P450 group I signature 117 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 PRINTS E-class P450 group I signature 536 560 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 PRINTS E-class P450 group I signature 582 605 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 PRINTS E-class P450 group I signature 572 582 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 243 541 - -
Ssu6g1443 646 SUPERFAMILY Cytochrome P450 9 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 Gene3D Cytochrome P450 540 631 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 Gene3D Cytochrome P450 260 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 PANTHER CYTOCHROME P450 71B11-RELATED 541 640 - -
Ssu6g1443 646 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 236 - -
Ssu6g1443 646 Pfam Cytochrome P450 5 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 Pfam Cytochrome P450 541 613 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 Pfam Cytochrome P450 274 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1443 646 PANTHER CYTOCHROME P450 71B11-RELATED 243 541 - -
Ssu6g1443 646 Gene3D Cytochrome P450 1 238 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1443 Ssu-Chr6 23571408 23588333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1443 551 633 Cytochrome P450 AT3G48320 43.373 1.62e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1443 K20617 - gmx:100792382 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1443 6 23571408 23588333 Ssu1g2292 1 64765135 64768287 PCT