Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1226 ATGTCTGAGGACACAGACACAGTACCCTCGTTCCATGGACTTCGCAAACCGAGCCGCGCAGGTACTCCTCGATGCTCACCACCGTCCAAGCCTCTCGCCGGTCGCAAAAAGAAAGTGCACGTTCTTGGACTGTTAATCCCCAGTTGTCGGAAGGTGTCATTCCTGAAGCTTCTAGAAGAAGCCACTGATTATACTTCGACCTTAGCAATGCAAGTGCAAGCCATGACGGCTCTCGCCGACCTAATCTCTGGTGGTGCACCGTCACCCGCTCTACTCCGTTTGAGTTCCGCCTTCACCACataa 303 0.5347 MSEDTDTVPSFHGLRKPSRAGTPRCSPPSKPLAGRKKKVHVLGLLIPSCRKVSFLKLLEEATDYTSTLAMQVQAMTALADLISGGAPSPALLRLSSAFTT 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1226 100 MobiDBLite consensus disorder prediction 1 35 - -
Ssu6g1226 100 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 33 90 IPR044660 GO:0006355
Ssu6g1226 100 PANTHER TRANSCRIPTION FACTOR BHLH150 33 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1226 Ssu-Chr6 20027315 20028107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1226 36 89 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 53.571 5.88e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1226 - - gmx:100802046 78.1814