Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1210 ATGTGCCTTCGCTTGGGTTTCGTTGACGTGGTGGTGGCGGCTTCCGCCTCCGTGGCGGAGCAATTCTTGAAGGTTCATGACGCCAATTTCTCGAGCCGGCCATCGAACCCCGGCGCCAAATACATAGCCTATAACTACCAAGACCTTGTGTCTGCTCCCTACGGCCCACGGTGGCGGTTGCTCCGGAAACTAAGCTCCGTTCACTTGTTTTCCGGCAAGGCCTTAGACGAGTTTAGACACCTGCGACAGGATGGAGAAAAACTCACCGACATAGAGATTAAAGCATTACTTTTGGGTTTGTTTGGAGCTGGGACAGACACATCATCGAGCACAGTAGAGTGGGCAATTGCTGAACTGATTAGAAACCCAAGAATTATGGTCCAAGTCCAACAAGAGTTGGATATTGTTGTAGGTCATGACAGGCTTGTGACTGAATTAGACTTGCCCCACCTTCCTTACTTACAGGCTGTGGTGAAGGAGACGTTTCGTCTCCACCCAGCAACCCCCCTTTCCCTCCCACGAGTTGCGCAAGAAGGTTGTGAGATATTTGGTTACCATATCCCCAAAGGTGCAACTCTCTTGGTCAATGTTTGGGCCATAGGACGTGACCCTAAAGAATGGTCTAACCCATTGGAGTTCAAGCCTGAAAGGTTCCTCCCTGGTGGTGAGAAGGCTAATGTTGACGTTAAGGGCAATAACTTTGAGGTTATACCCTTCGGTGCTGGGCGTAGAATATGTGCTGGTATGGGCCTAGGCCTAAAAGTGGTTCAACTGCTCACTGCTACCCTCGCCCATGCATTTGATTGGGAGTTAGAGAATGGGCTTAACCCAGAAAAGCTTAACATGGATGAAGCATTTGGGATCACCCTCCAAAGAGTAGTGCCTCTTTTTGTCCACCCTCGCCCTAGGCTCTCACGACATGTCTATTCATCATCGTGA 939 0.4995 MCLRLGFVDVVVAASASVAEQFLKVHDANFSSRPSNPGAKYIAYNYQDLVSAPYGPRWRLLRKLSSVHLFSGKALDEFRHLRQDGEKLTDIEIKALLLGLFGAGTDTSSSTVEWAIAELIRNPRIMVQVQQELDIVVGHDRLVTELDLPHLPYLQAVVKETFRLHPATPLSLPRVAQEGCEIFGYHIPKGATLLVNVWAIGRDPKEWSNPLEFKPERFLPGGEKANVDVKGNNFEVIPFGAGRRICAGMGLGLKVVQLLTATLAHAFDWELENGLNPEKLNMDEAFGITLQRVVPLFVHPRPRLSRHVYSSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1210 312 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 239 248 IPR017972 GO:0005506|GO:0016705
Ssu6g1210 312 Gene3D Cytochrome P450 80 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 SUPERFAMILY Cytochrome P450 2 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PANTHER FLAVONOID 3'-MONOOXYGENASE 1 84 - -
Ssu6g1210 312 PANTHER FLAVONOID 3'-MONOOXYGENASE 84 301 - -
Ssu6g1210 312 PRINTS E-class P450 group I signature 246 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS E-class P450 group I signature 196 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS E-class P450 group I signature 236 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 Pfam Cytochrome P450 83 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS P450 superfamily signature 103 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS P450 superfamily signature 237 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS P450 superfamily signature 246 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PRINTS P450 superfamily signature 156 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 Gene3D Cytochrome P450 1 79 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1210 312 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 84 - -
Ssu6g1210 312 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 84 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1210 Ssu-Chr6 19719594 19785606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1210 3 84 Cytochrome P450 AT5G07990 80.488 5.57e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1210 K05280 - gmx:100807293 385.571