Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1209 ATGTCTCCTTGGGTTATTGGCTTTGCTACTATTGTAGCAGCTATCCTTATTTATCGGCTTTTGCAGCTCATAAATAGGCCTTCATTACCTCTGCCGCCAGGACCAAGGCCATGGCCCATAGTAGGAAACTTGCCCCACATGGGCCGTGCGCCACACCAGGCCCTGGCAGCCTTGGCCGGCACTTATGGCCCACTCATGCACCTCCGCTTGGGCTCCGTTCATGCCGTGGTGGCAGCTTCCGCCTCCGTGGCGGAGCAGTTCTTGAAGGTCCACGACGCCAATTTCTCCAGCCGGCCAAGGAACTTCGTAAGCACATACATGTCCCATAACGGGCAAAATTTTGCTTCTTCTCCCTACGGCCCACTGTGGCGGTTGCTCAGGAAAATAAGCTCCACTCACATGTTTTCTGGTAAGGCCATGGGTGATTCTATACAAGTGCGACAGGAAGAGGTGAAAAGATTGACATGTAATTTAGCAAATTCAAGCTCTAAAGTAGTGAATTTGGGACAACTGGTAAATGTATGTACCACCAACGCATTGGCAAGGGTAATGATAGGCCGACGAGTTTTCAATGATGGCAATAGTGACTGTGATCCTAGGGCAGATGAGTTTAAATCTATGGTGGTGGAGACTATGGTATTGCTTGGACTTTTCAATGTTGGTGACTTCATTCCTGGCTTAGACTGGTTAGACCTTCAGGGAGTGAAAGTTAAGGCGAAGAAATTACGCAAGAGGACTGATGCATTTTTAACTAACATTCTTGAGGAACATAAGATTTCCAAAAATGAGGAGCATCAGGACTTGTTGAGTGCATTGTTGTCACTTAAAGAGACTCCTCAAGAAGGACATAAACTCACTGAACCAGATATCAAAGCAATACTTTTGGTTCTGTTTGGAGCTGGGACAGACACATCATCGAGCACAGTAGAGTGGGCAATTGCTGAACTAATTAGAAACCCAAGAATTATGGTCCAAGTCCAACAAGAGTTGGATACTATTGTAGGTCATGACAGGCTTGTGACTGAATTAGACTTGCCCCATCTTCCTTATTTACAGGCTGTGGTGAAGGAGACACTTCGTCTCCACCCACCCACCCCCCTTTCCCTCCCACGAGTTGCAGAAGAGAGTTGTGAGATATTCGGTTACCATATCCCCAAAGGTGCAACTCTCTTGGTCAATGTTTGGGCCATAGGGCGTGACCCTAAAGAATGGTCTAACCCATTGGAGTTCAAGCCTGAAAGGTTCCTCCCTGGTGGTGAGAAGGCTAATGTTGATGTTAGGGGCAATAACTTTGAGGTTATACCCTTTGGTGCTGGGCGTAGAATATGTGCTGGTATGGGCCTAGGCCTAAAAGTGGTTCAGTTGCTCACTGCTACCCTAGCTCATGCATTTGATTGGGAGTTGGAGAATGGGCATAACCCAGAAAAGATTAACATGGATGAAGCGTATGGGATCACCCTCCAAAGAGCAGTGCCTCTTTTTGTCCACCCTCGCCCTAGGCTCTCACGACATGTGTATTCATCATCGTGA 1530 0.4745 MSPWVIGFATIVAAILIYRLLQLINRPSLPLPPGPRPWPIVGNLPHMGRAPHQALAALAGTYGPLMHLRLGSVHAVVAASASVAEQFLKVHDANFSSRPRNFVSTYMSHNGQNFASSPYGPLWRLLRKISSTHMFSGKAMGDSIQVRQEEVKRLTCNLANSSSKVVNLGQLVNVCTTNALARVMIGRRVFNDGNSDCDPRADEFKSMVVETMVLLGLFNVGDFIPGLDWLDLQGVKVKAKKLRKRTDAFLTNILEEHKISKNEEHQDLLSALLSLKETPQEGHKLTEPDIKAILLVLFGAGTDTSSSTVEWAIAELIRNPRIMVQVQQELDTIVGHDRLVTELDLPHLPYLQAVVKETLRLHPPTPLSLPRVAEESCEIFGYHIPKGATLLVNVWAIGRDPKEWSNPLEFKPERFLPGGEKANVDVRGNNFEVIPFGAGRRICAGMGLGLKVVQLLTATLAHAFDWELENGHNPEKINMDEAYGITLQRAVPLFVHPRPRLSRHVYSSS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1209 509 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 498 - -
Ssu6g1209 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Ssu6g1209 509 PANTHER FLAVONOID 3'-MONOOXYGENASE 5 498 - -
Ssu6g1209 509 SUPERFAMILY Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 Gene3D Cytochrome P450 19 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1209 509 Pfam Cytochrome P450 32 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1209 Ssu-Chr6 19683497 19687249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1209 8 506 Cytochrome P450 AT5G07990 62.327 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1209 K05280 - gmx:100778531 796.578