Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1175 ATGTCCTCGGAACTCTGCTCTCTCTTTCTCCCGCTATCCGCGTGCTCAACCTTCCTCAGTTTCAATGTCCTTCTCGGTTTTCTGTTCCTCGTGGCCGTGTTCGGCTACTGGCTGGTTCCCGGTGGTCTCGCTTGGGCTCTGTCCAAGTTCAGGCTGGGAACAGCGCTGAACAACAAAGCTGCGATACCCGGACCTTCCGGTTTCCCGGTGCTGGGTCTGGTTCCGGCTTTCACGGGGACCCTTACTCACAGGGTCCTCGCTAAGCTGGCTCACGCTTTCGGTGCCAAGCCTGTGATGGCATTTTCCGTGGGGTTCACTCGTTTCATCATCTCTTCTAAACCCGAAACTGCGAAAGAGATTCTGAGCAGTTCCGCTTTCGCGGATCGTCCTGTTAAGGAATCCGCTTACGAGCTTCTTTTTCACCGCGCAATGGGGTTCGCACCGTACGGTGAGTACTGGAGGAACCTGAGGAGGATTTCCGCGACTCACATGTTCTCTCCCAAGAGGATTGCCGCCTCCGGGGAGTTCCGGGCCCAGGTTGGGGCCCAGATGGTGAGGGACATCATGGGCCTGATGGGGAAGGACGATGAGGTGGAGGTGAGGAAGGTGTTGCATTTCGGGTCCTTGAACAACGTGATGAAGAGCGTGTTTGGGAGGAGTTATGTGTTTGATGAGGGGGGTGAGGGGTGTGAGCTTGAGGAGTTGGTGAGTGAGGGGTACGATTTGCTTGGGGTGTTTAACTGGAGTGACCACTTTCCTCTCTTGGGGAGGTTGGATTTGCAAGGAGTGAGGAGCAGGTGCAGGAGTCTGGTGGAAAGAGTGAATGTTTTTGTGGGGAAAATCATATGGGAGCACAGACTGAAGAGGGCTGCTGAAGGTGATGATAAGGTTAGGGATGTTGAGAGCTCTGGGGATTTTGTTGATGTGCTGCTGGATTTGGAGAAGGGGAACAGGCTTCAACACTCTGACATGGTTGCTGTTTTGTGGGAAATGATCTTTAGGGGGACTGATACAGTGGCAATTCTTCTAGAGTGGATTCTTGCTAGGATGGCTCTGCACCCAGAAATCCAAGCCAAGGCTCAGTCTGAAATTGACTCTGTTGTTGGGTCTGGCCGCACTGTGACCGATGATGACCTTCCCAACCTTCCTTACGTGCGTGCCATAGTGAAGGAAACCCTGAGGATGCACCCACCGGGTCCCCTCCTCTCATGGGCCAGGCTTTCCATCCACGACACACACATTGGGCCCCACTTCGTTCCAGCTGGCACTACCGCAATGGTTAACATGTGGGCCATCACTCACGACCGGGAGGTTTGGTCTGACCCGGAAGAGTTCAAGCCAGAGCGTTTCGTGAAGGACGAGGATGTGCCAATTATGGGGTCTGATCTCAGGTTGGCACCTTTCGGCGCTGGGAGAAGGGTGTGCCCAGGAAAAGCCATGGGCTTGGCCACTGTTGAGCTTTGGCTTGCTATGTTCCTACAATGCTTCAAATGGATGCCTTGTGATTCTGGTGTGGACTTGTCTGAGTGCTTGAAACTCTCTATGGAAATGAAACGCTCTCTCATCACCAAAGCTGTTGCAAGGCCTGCTGGTTCTATTACTATTGACCCTCTTGCTTGTGTAAACCATATCGGTTAA 1638 0.533 MSSELCSLFLPLSACSTFLSFNVLLGFLFLVAVFGYWLVPGGLAWALSKFRLGTALNNKAAIPGPSGFPVLGLVPAFTGTLTHRVLAKLAHAFGAKPVMAFSVGFTRFIISSKPETAKEILSSSAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPKRIAASGEFRAQVGAQMVRDIMGLMGKDDEVEVRKVLHFGSLNNVMKSVFGRSYVFDEGGEGCELEELVSEGYDLLGVFNWSDHFPLLGRLDLQGVRSRCRSLVERVNVFVGKIIWEHRLKRAAEGDDKVRDVESSGDFVDVLLDLEKGNRLQHSDMVAVLWEMIFRGTDTVAILLEWILARMALHPEIQAKAQSEIDSVVGSGRTVTDDDLPNLPYVRAIVKETLRMHPPGPLLSWARLSIHDTHIGPHFVPAGTTAMVNMWAITHDREVWSDPEEFKPERFVKDEDVPIMGSDLRLAPFGAGRRVCPGKAMGLATVELWLAMFLQCFKWMPCDSGVDLSECLKLSMEMKRSLITKAVARPAGSITIDPLACVNHIG 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1175 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Ssu6g1175 545 PANTHER CYTOCHROME P450 78A7-RELATED 2 528 - -
Ssu6g1175 545 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 Pfam Cytochrome P450 63 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 Gene3D Cytochrome P450 54 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1175 545 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 528 - -
Ssu6g1175 545 SUPERFAMILY Cytochrome P450 62 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1175 Ssu-Chr6 19223115 19225059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1175 1 528 Cytochrome P450 AT1G74110 65.121 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1175 K20619 - gmx:100803303 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1175 6 19223115 19225059 Ssu6g1175 6 19223115 19225059 ECH