Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1151 ATGAATCAAACGTCAGGTAACAATGGTACGGGGAGGTTTGAGTGGAGCTGGAACTCCTCAGCGTCATTCCTGTACGGTGGGCTTGCACCCATTTTTGGAGTCATTGGGTTAGCGTTGCTTGTGGTAGCATGTTCCCGGTGTCGAAGGTCTCAAACAGAGTCACTGCGTCACTCTGACGTGAACAAGTGCGGAGGGGTAACAAGCCCACAAGTTAATGAAGAGCCTAACATTTTGGTAATCGTAGCCGGAGAAGAGCACCCAACTCATGTGGCAAAGCCCCTCTCTGTGTGA 291 0.5086 MNQTSGNNGTGRFEWSWNSSASFLYGGLAPIFGVIGLALLVVACSRCRRSQTESLRHSDVNKCGGVTSPQVNEEPNILVIVAGEEHPTHVAKPLSV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1151 96 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 4 94 IPR040359 GO:0080143
Ssu6g1151 96 PANTHER PROTEIN, PUTATIVE-RELATED 4 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1151 Ssu-Chr6 18724868 18725158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1151 17 93 Glutamine Dumper (GDU) Family AT2G24762 38.272 1.53e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1151 - - ccaj:109807490 138.272