Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1138 ATGGAGATTACTGCCATGGCTTCTTCAGCTACTCCAAGACCTTCTCTTCCAACTCCTTCTTCCACTTCTCCACACACAGTAGTCACCACTTTTAGCAAACCTCAAATAAGACGCTCCCACATAGCACTACCGACCTCAGCCACCATTTCACTACTCGCTCTCTTCGCCCCTCCCAACGAAGCCAAAGCCGCTGTCACCATCGCCAAGGACCAGATTGTCTCTTCCCTCACCCAAgtggaGAAAACGATCGATCAGGTTCAGGAAGTGGGTTCGAGTGTTCTGGACACGGCACAGCGTGTTGCTGAAGTCATAGGGAACGCTTTGAAGCCTGGCATCGAAACGGCGTTACCAATTGTGCAGCAGGCTGGGGAAGAGGCCTTGAAAATTGCTTCCCCTGCCATCTCTGAGGCTTCCAAGAAGGCCCAAGAAGCACTCCAAAGCTCCGGTGTTGATACCGAACCTGTTATCACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACGACCAAGGTGATTGAAGTTGCCAAGCCAATAGCTTCCTCAACCGTTGAAATCATATCTTCTTCAGATCCTACTGTGATTGCTGCAACAGCAGGAGCACTATTTGTTGCTTACCTCCTGATTCCTCCTATCTGGTCTGCCATCTCCGCTAATCTTCGTGGTTACAAAGGAGACCTGACTCCTGCTCAAACCCTTGATTTGATATCTACACAAAGCTACGTTTTGATTGATATCAGGTCAGAGAAAGATAAGGACAAGGCTGGCATCCCTCGCCTCCCCTCTAGTGCTAAAAACAGGATGGTTGCCATTCCTTTGGAAGAACTGCCAAGCAAGCTGAGAGGGCTGGTCAGGAATGTGAAGAAATTGGAAGCTGAAGTAGTCGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAATGTTGTGATCTTGGACTCGTACTCGGAAGTAGCAAAAATAGTTGGAAGAACGCTAACCAGCCTTGGTTTTAAGAACACATGGATTGTTGCTGATGGATTCTCTGGGAACAAAGGGTGGTTGCAGAGTAGATTAGGAACAGATTCGTATAACTTTTCGTTCGCAGAGGTGCTGTCACCATCCAGGGTCATCCCTGCGGCAGTCAGAAGTTTCGGCACAACCAGCCAATCTAGCACGAAGCTTATTCCTGGGGCTGACTAG 1188 0.4823 MEITAMASSATPRPSLPTPSSTSPHTVVTTFSKPQIRRSHIALPTSATISLLALFAPPNEAKAAVTIAKDQIVSSLTQVEKTIDQVQEVGSSVLDTAQRVAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVDTEPVITAAKTVADAAQQTTKVIEVAKPIASSTVEIISSSDPTVIAATAGALFVAYLLIPPIWSAISANLRGYKGDLTPAQTLDLISTQSYVLIDIRSEKDKDKAGIPRLPSSAKNRMVAIPLEELPSKLRGLVRNVKKLEAEVVALKISYLKKINKGTNVVILDSYSEVAKIVGRTLTSLGFKNTWIVADGFSGNKGWLQSRLGTDSYNFSFAEVLSPSRVIPAAVRSFGTTSQSSTKLIPGAD 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1138 395 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 6 392 IPR044690 GO:0009704|GO:0071277|GO:0090333
Ssu6g1138 395 Coils Coil 273 300 - -
Ssu6g1138 395 Gene3D - 225 363 IPR036873 -
Ssu6g1138 395 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 203 345 IPR036873 -
Ssu6g1138 395 MobiDBLite consensus disorder prediction 1 26 - -
Ssu6g1138 395 CDD RHOD 231 345 - -
Ssu6g1138 395 ProSiteProfiles Rhodanese domain profile. 237 358 IPR001763 -
Ssu6g1138 395 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 6 392 - -
Ssu6g1138 395 SMART rhod_4 227 355 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1138 1 316 Sulfurtransferasese or Rhodanese AT5G23060 66.246 2.39e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1138 - - gmx:100806845 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1138 6 18581683 18585720 Ssu6g1138 6 18581683 18585720 ECH