Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1127 ATGGCTATTCTTTTCAAAGCCTCATACCCACTTTTCCTTGGCTTGATTCTTTTCTGTGGTGCCTCCCTTGTCAATTGCACTGAGTTTGAAGTTGGAGGTCACGAAGGTTGGATTGTCCCAAAGTCAAAGGACAATGATCAAATGTACAATCAGTGGGCATCCCAAAACAGATTCAAAGTTAATGACACTCTTCGGTTGTTCTATTTCATTAGTGGGGTTAGTGGTCACTGTGACAGAGGGCAGAAGATGATCATCAAAGTTTTGGATATAGAGGCAGCACCCTCGCCTCAATCTGCAAATGAGAATGCACCAAAGTTACCTTCTAAAGGCGGAGTTGCTGAGATGAGTCCTATGAGTGTAATAACAACATCCACCCTTGGTGTTATGTCAATCTTCGTGCTTCAGCTTTATGCTTGA 417 0.4293 MAILFKASYPLFLGLILFCGASLVNCTEFEVGGHEGWIVPKSKDNDQMYNQWASQNRFKVNDTLRLFYFISGVSGHCDRGQKMIIKVLDIEAAPSPQSANENAPKLPSKGGVAEMSPMSVITTSTLGVMSIFVLQLYA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1127 138 PANTHER BLUE COPPER PROTEIN 66 101 IPR039391 GO:0009055
Ssu6g1127 138 PANTHER BLUE COPPER PROTEIN 21 65 IPR039391 GO:0009055
Ssu6g1127 138 SUPERFAMILY Cupredoxins 25 88 IPR008972 -
Ssu6g1127 138 Gene3D - 24 67 IPR008972 -
Ssu6g1127 138 PANTHER EARLY NODULIN-LIKE PROTEIN 5 66 101 - -
Ssu6g1127 138 PANTHER EARLY NODULIN-LIKE PROTEIN 5 21 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1127 Ssu-Chr6 18408081 18408944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1127 15 91 Phytocyanin Superfamily AT1G48940 42.373 1.21e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1127 - - gmx:102667643 201.83