Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1074 ATGGAGAACCTCTTCTCCTGCCTCAagcttctctctttctccttcatGCTCCTTCTCTTCGTGCTCAAACTCGCTGTCTTGCTCTGGTGGCGTCCCAGAAAAATTGAAGGCCATTTCTCCAAGCAAGGGATCAGAGGCCCCCCATATCGTTTCTTCATTGGAAACGTTAAGGAACTCGTCGGCATGATGTTGAAGGCCTCTTCTCAACCCATGCCTTTCTCTCACAACATTCTTCCCAGAGTCCTTTCCTTCTACCATCACTGGAGGAAAATTTATGGTGCAACATTCCTAGTTTGGTTTGGACCCACCGTTCGTCTCACAGTCTCTGATCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCAGAATTTTACGAGAAAAACGAAGCTCCACCACTTGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACCGAAAAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAAttgcTGATACCGGTGATGGCAACAAGCGTGGTGGAGATGTTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAAACCCTAACAGAAGATGTCATTACGAGAACGGCATTTGGAAGCAGCTACGAAGATGGCAAAGCCATTTTCCGTCTACAAGCCCAACAAATGGACTTAGCCGCCGATGCTTTCCAAAAAGTATTCATTCCAGGTTACAGattctttCCCACAAGGAGGAATATAAAATCTTGGAAATTGGACAAGGACATTAAGAAATCGCTGGTGAAGCTGATCGAGCGACGGAGAGAGAATTCGTGTGGGAAGGAGAGGGTGGAAAAGGGGCCAAAGGATTTGTTGGGGCTAATGATTCAGGCCTCCAACATCAATTCCTCCAATGTCACAGTGGATGACATCGTGGAAGAGtgcaagagctttttctttgcAGGCAAACAGACCACATCCAACCTGCTGACGTGGACGACCATTCTCCTAGCGATGCACCCACACTGGCAGGAACGGGCACGTGACGAGGTTTTCAAGATGTGTGGAGCACGTGACCTTCCCACCAAAGACCACGTTGCAAAGCTGAGGACGCTGAGCATGATCGTCAACGAGTCCTTAAGACTCTACCCACCAACGATCGCCACAATCAGACGGGCGAAAACAGACGTGGAGTTGGGGGGCTACAAGATACCACGTGGGACGGAGTTGTTGATTCCAATCCTGGCCGTTCATCATGATCAAGCCATATGGGGCAATGATGCGAACGAGTTCAATCCTGGCCGTTTCTCTGATGGGGTGGCCCGCGCCGCGAAGCATCCCTTGGCGTTCATACCGTTTGGTCTGGGTGTGCGCACATGCATTGGACAAAACCTCGCGGTGCTACAAACCAAACTGGCCCTGGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTGATGCTACTCTACCCTCAGTACGGCGCACCAATCATTTTCCAACACTTGTCAACAATGGATGACCATGATCAAGGGTCCTCATAG 1578 0.4823 MENLFSCLKLLSFSFMLLLFVLKLAVLLWWRPRKIEGHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPFSHNILPRVLSFYHHWRKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMATSVVEMLEKWSAMGEKGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMDLAADAFQKVFIPGYRFFPTRRNIKSWKLDKDIKKSLVKLIERRRENSCGKERVEKGPKDLLGLMIQASNINSSNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQERARDEVFKMCGARDLPTKDHVAKLRTLSMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPILAVHHDQAIWGNDANEFNPGRFSDGVARAAKHPLAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLSTMDDHDQGSS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1074 525 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 SUPERFAMILY Cytochrome P450 43 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 509 - -
Ssu6g1074 525 PANTHER CYTOCHROMEA2 10 509 - -
Ssu6g1074 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Ssu6g1074 525 Gene3D Cytochrome P450 29 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 Pfam Cytochrome P450 82 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu6g1074 525 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1074 Ssu-Chr6 17447079 17450429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1074 9 519 Cytochrome P450 AT2G26710 79.223 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1074 K15639 - gmx:100780027 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1074 6 17447079 17450429 Ssu6g1074 6 17447079 17450429 ECH