Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1064 ATGGCCACCACCGCCACCGCTACTACACCCTGTAGAGACGAACCCGACTACGACAGCAGCTCCTCCTCGATCACTGTGCCGGAATCAAGCCGGAGCTGGATGACCAACCTCAGCTTCGGCAGCCGGCGCCGCCGGAGCTCCGTTTCCGTCTGTTCCTCCACCTCAGAGAGTCCACGCGTGAAGCCCCACAAGGCCAACCAGGCCGCGTGGGAGGCCATGCGGCGGCTCCGGCGCGACAAGGGGCAGGTGGGGCTGGACCACTTCCGGCTGCTGCGGCGGCTGGGGAGCGGCGACATCGGGAACGTGTACCTTTGCCAGATAAGGAACCCCGTGGTGGGGTTGCCGCAGTGCTTTTATGCCATGAAAGTGGTGGACAGAGAGGCACTTGCTATAAGGAAGAAGCTGCAGAGAGCGGAGATGGAGAAGGAGATTCTAGCCATGCTTGATCACCCCTTCTTGCCTACCTTGTACACTGAGTTTGACGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGCCCCGGTGGAGACTTGTATGCTGCACGCCAACGCCAGCCAGGGAAGCGCTTTTCCATAACATCTGCTAAGTTTTATGCGGCTGAGACGCTATTGGCATTAGAGTATCTTCACATGATGGGCATAGTGTACAGGGATCTGAAGCCGGAGAATGTGCTTGTGAGGGAGGATGGGCACATTATGCTTTCAGATTTTGATCTTTCGCTCAAGTGTGACGTTGTTCCGAAGCTGTTAAGGAGTAAGACCAGATTGGAACGCAGTATCAAGAGCACAAAGAGATCTGCGCCTGCCTGCACTGCCCCCATGCAGCCTGTGCTGTCATGTTTCTCGGCATCAAGCAAGAAAAATAAAGCGACGGTGACAACAGTTATAAGGGAGAATGTTGAAGTGGAAGAACTTGATCCGGAGCTGGTGGCTGAACCCATCGATGCTAAGTCCAAGTCATTTGTGGGGACACATGAGTACTTGGCGCCAGAAGTGATCTTGGGGCAAGGACATGGGAGTGCAGTGGATTGGTGGACGTTTGGGGTGTTCTTGTATGAGATGTTATACGGGAGAACACCCTTCAAAGGTGAGAACAATGAGAAAACTCTCGTGAACATTTTGAAGCAGCCGTTGGTTTTCCCTAGGATTGCAGTTAGCAGCAGCAAGGAGTTTGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGTTGTTAGTGAAGAATCCCAATAAGAGAATTGGAAGTTGCATGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAAAGGTGTAAATTGGGCCTTAATTAGATCAGTTAGGCCCCCTGAGGTCCCTGGTGACATGAACAAAATTAGGAGTAGGGTTTTGGTACCAAAACTAAGCAAGCACGACAGGGATCAGCCATATCAGCATAGAACTCATCATTTTGAATACTTCTAA 1440 0.5146 MATTATATTPCRDEPDYDSSSSSITVPESSRSWMTNLSFGSRRRRSSVSVCSSTSESPRVKPHKANQAAWEAMRRLRRDKGQVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSITSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKSTKRSAPACTAPMQPVLSCFSASSKKNKATVTTVIRENVEVEELDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLVFPRIAVSSSKEFEEMVKVQDLISKLLVKNPNKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPGDMNKIRSRVLVPKLSKHDRDQPYQHRTHHFEYF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1064 479 Gene3D Transferase(Phosphotransferase) domain 1 315 445 - -
Ssu6g1064 479 MobiDBLite consensus disorder prediction 48 67 - -
Ssu6g1064 479 Coils Coil 121 141 - -
Ssu6g1064 479 PANTHER FLIPPASE KINASE 1-RELATED 10 479 - -
Ssu6g1064 479 ProSiteProfiles Protein kinase domain profile. 88 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1064 479 Gene3D Phosphorylase Kinase; domain 1 86 172 - -
Ssu6g1064 479 SUPERFAMILY Protein kinase-like (PK-like) 65 445 IPR011009 -
Ssu6g1064 479 SMART serkin_6 88 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1064 479 Gene3D Transferase(Phosphotransferase) domain 1 173 242 - -
Ssu6g1064 479 PANTHER PROTEIN KINASE PINOID 2 10 479 - -
Ssu6g1064 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Ssu6g1064 479 Pfam Protein kinase domain 89 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1064 479 Pfam Protein kinase domain 317 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1064 479 CDD STKc_phototropin_like 86 445 - -
Ssu6g1064 479 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1064 Ssu-Chr6 17312033 17314074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1064 13 479 AGC Kinase Gene Family AT2G26700 59.125 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ssu6g1064 Pkinase 6.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1064 K08286 - gmx:100777988 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1064 6 17312033 17314074 Ssu6g1064 6 17312033 17314074 ECH