Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1055 ATGGCTGCTATCTTGAGGAGGTTTGCGAGGGCCACTCCGATCCCATTCACTGCCCAATCCAACTCCTCTCACACTAATCTCCGCCTACCCTTTACTGCCATCGCCGCCATTTCCGGCGGAGTCTCCCTCTTTTACTACCATTCCTCTCCCAACCTTGTTCATTCACAACAAACGGAACAAGAGGAAAGTAAAAATATCGCACTCAATCCGGATAAATGGGTCGAGTTTAAGTTGCAGGACACTGCCAGGGTTAGTCACAATACCCAGTTATTCAGGTTTTCATTTGATCCCACTCAGAAGTTGGGTTTGGATATTGCTTCTTGCATCCTTACAAGGGCTCCATTGGGGCAAGATGCTGAAGGAAAACCAAAATTTGTCATACGTCCGTATACTCCCATTTCAGATCCAGAATCGAAGGGATATTTTGATTTGCTAATCAAGGTGTATCCTGAAGGGAAAATGAGCCAGCATTTTGCAAGCTTAAAACCAGGTGATGTTGTTGAAGTGAAAGGGCCCATTGAAAAGCTCAGATATACTCCTAATATGAAGAAGCATATTGGCATGATTGCTGGTGGCACAGGAATTACTCCTATGCTTCAGGTAATTGAAGCTATATTGAAGAATCCTGATGACAAAACTCAGATATCATTACTTTATGCTAATGTCTCCCCCGATGACATACTGCTTAAACAAAAGCTTGACATTCTAGCAACAAGCTACCCAAACTTAAAGATATTCTACACTGTAGATAATCCAACAAAAAATTGGAGAGGAGGTGCAGGTTACATATCAAAGGATATGGTTGTGAAAGGCTTACCCTGTCCTAGTGATGATACTCTTATACTTGTGTGTGGACCCCCTGGGATGATGAAACAAATATCTGGAGAAAAGGCCAAGGACTGGACACAAGGCGAgGTTTCTGGCATCCTAAAAGAGGTTGGATACACTGAACAAATGGTTTACAAATTCTGA 972 0.427 MAAILRRFARATPIPFTAQSNSSHTNLRLPFTAIAAISGGVSLFYYHSSPNLVHSQQTEQEESKNIALNPDKWVEFKLQDTARVSHNTQLFRFSFDPTQKLGLDIASCILTRAPLGQDAEGKPKFVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDKTQISLLYANVSPDDILLKQKLDILATSYPNLKIFYTVDNPTKNWRGGAGYISKDMVVKGLPCPSDDTLILVCGPPGMMKQISGEKAKDWTQGEVSGILKEVGYTEQMVYKF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1055 323 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 165 321 IPR039261 -
Ssu6g1055 323 PRINTS Cytochrome B5 reductase signature 280 288 - -
Ssu6g1055 323 PRINTS Cytochrome B5 reductase signature 187 206 - -
Ssu6g1055 323 PRINTS Cytochrome B5 reductase signature 225 236 - -
Ssu6g1055 323 PRINTS Cytochrome B5 reductase signature 128 135 - -
Ssu6g1055 323 PRINTS Cytochrome B5 reductase signature 164 178 - -
Ssu6g1055 323 Gene3D Translation factors 66 169 - -
Ssu6g1055 323 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 187 206 IPR001709 GO:0016491
Ssu6g1055 323 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 225 236 IPR001709 GO:0016491
Ssu6g1055 323 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 128 135 IPR001709 GO:0016491
Ssu6g1055 323 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 280 288 IPR001709 GO:0016491
Ssu6g1055 323 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 71 179 IPR017927 GO:0016491
Ssu6g1055 323 CDD cyt_b5_reduct_like 76 323 - -
Ssu6g1055 323 Pfam Oxidoreductase FAD-binding domain 76 178 IPR008333 -
Ssu6g1055 323 PANTHER NADH-CYTOCHROME B5 REDUCTASE 27 323 IPR001834 GO:0016491
Ssu6g1055 323 PANTHER NADH-CYTOCHROME B5 REDUCTASE-LIKE 27 323 - -
Ssu6g1055 323 SUPERFAMILY Riboflavin synthase domain-like 66 181 IPR017938 -
Ssu6g1055 323 Gene3D - 170 323 IPR039261 -
Ssu6g1055 323 Pfam Oxidoreductase NAD-binding domain 188 293 IPR001433 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1055 Ssu-Chr6 17204017 17209728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1055 62 323 NADPH P450 reductases AT5G17770 42.045 3.64e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1055 K00326 - gmx:100781191 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1055 6 17204017 17209728 Ssu6g1055 6 17204017 17209728 ECH