Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1036 ATGGCCTTCATACCCGCTCTGTTGTGGCTGTTGTTCATGTTATTTGCAAAAGAAGGCACAGGAGAAAGCATGATTGAGTTGGGGTCATGGCTCTCCCCCAAAGGCAATCATAGTTCATGGGCATCAAGTTCTGGTCACTTTGCTTTTGGCTTTTACCCACAAGGTAATGGCTTTGCTGTTGGAATATGGCTGGTTAGTGGTAGTCCACCTGAAAAAACTATTGTCTGGACCGCTAACCGTGACAGCCCCCCACTCTCCCATAATTACACGTTGAACTTGACCAAGACTGGCCTGTGGCTTTTCCAAAGTGGGAGGGGAGGCCAAGTTCTCATTTCAAGTGTTGATGCGGTAGTTTCTTCAGCATCTATGCTTGATTCCGGCAACTTTGTGCTCTATAATGATACCCACCACACTGTTGTCTGGCAAAGCTTTGATGAACCAACTGACACCATATTAGGAGGTCAGAATTTAAGCAGCGGTGGCAAACTGGTTTCTAGTGTGTCCAGATCAGACCATTCGAGTGGACGTTACTTTCTCATCATGCAATTTGGTGGAAACCTCGTTGCTTACCCTAAGAACAGCCCAGCAAGTGCCGGTGATGCTTACTGGTCTTCAAATACTTGGGCTTCAACTTTCCGACACCTCAGTCTTAACGTCTCAGGCTTTCTTTGCCTTACTGGTGATGATGTGCTTCGGTGTTTTTACAATAGCATCAGTCCTGGAAAGAAATCACACAACACAAGTTCAATCTACCGTGCAACACTTGAGGTAAACGGGAACCTGAGATTGTATGAGCACCAATTTGAGGCCAGTGGTAGTTCACATGTCCAAGAACTGTGGAGTACCTCGCTTGAGACATGTCAAATCAAGGGGGTTTGTGGGTTTAACCGTTATTGCTCAAACGTAACAGGCCATGCCGTGTGTGAGTGTTTTCCTGGTTTCGTCCCCTCCAAAAGCAGCGGTAACTTGTCTCTGGACTGCATACTGGCCCATAGCAAAGATGGTTGCCAAAGCAGTAAAGAACCaactattttgtataatattactCAGTTGGAGAATGTGTATTGGGATGATGAGAGTAATACTCCATATTCTGTCGTACCGATGAAGAAGGAAGAGTGCAGGAAGTCTTTCCTGGAAGATTGTGATTGCATGGCAGTATTATATTCCGACGGCAACTGCAATAAATACAGACTCCCACTAACATATGGCAGAAAGGTTCAAAATGCATCGAACGTGGCCTTCTTCAAGATGCTTTCGGGAATTGTCCTAAGTCCAACTCCAAACAACTCCAAACCGAAGCCTAAGGTCGCTGTGGATAACAAGACAAGTCTGATCATGATTCTAGCCTTTACTTTGGGTTTCATTTCATTGTTATCTTTGGTATTTGCGGTGTCCATTTTCTTCACTTATAAGCGGAAAGTTTATAGGTATTCAACGTTGTCAACAAGTGAGAATCTGAGATTTGCTGAAGACTGTTCTCTGCGTTCATTTTCTTTCGATGAACTTGTGAAATCGACCCGAGGCTTTACGGAAGAGATAGGCAGAGGATCATTTGGAGCGGTTTATAGAGGCATAACAGGTGACAGTAACAGAAGCATCGCTGTCAAGAGACTGGAGAGAATTGTTGATGAAGGGGAGAGGGAATTTCGAACTGAAATTACTGCCATTGCTCGAACACATCATAGGAATTTGGTTAAGCTCATTGGTTTTTGCATCAATGGATCTAGGAAGCTTCTTGTTTATGAATATGTCAGCAACGGGTCTCTTGCAAGTCTTCTCTTCAATGCAGGGCAGTTAAATAAACTTgttaaagaagatgaagaaggtgTAGATTGGATGATATTGGAACGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACGATCCGCCTCTTCGTCCTTCAATCAAGAATGTCATTTTGACGTTGGAAGGATTGAAAGATATTCCAATTCCTCCCTCTCCAGCCCACCTCGCTAAATAA 1986 0.4355 MAFIPALLWLLFMLFAKEGTGESMIELGSWLSPKGNHSSWASSSGHFAFGFYPQGNGFAVGIWLVSGSPPEKTIVWTANRDSPPLSHNYTLNLTKTGLWLFQSGRGGQVLISSVDAVVSSASMLDSGNFVLYNDTHHTVVWQSFDEPTDTILGGQNLSSGGKLVSSVSRSDHSSGRYFLIMQFGGNLVAYPKNSPASAGDAYWSSNTWASTFRHLSLNVSGFLCLTGDDVLRCFYNSISPGKKSHNTSSIYRATLEVNGNLRLYEHQFEASGSSHVQELWSTSLETCQIKGVCGFNRYCSNVTGHAVCECFPGFVPSKSSGNLSLDCILAHSKDGCQSSKEPTILYNITQLENVYWDDESNTPYSVVPMKKEECRKSFLEDCDCMAVLYSDGNCNKYRLPLTYGRKVQNASNVAFFKMLSGIVLSPTPNNSKPKPKVAVDNKTSLIMILAFTLGFISLLSLVFAVSIFFTYKRKVYRYSTLSTSENLRFAEDCSLRSFSFDELVKSTRGFTEEIGRGSFGAVYRGITGDSNRSIAVKRLERIVDEGEREFRTEITAIARTHHRNLVKLIGFCINGSRKLLVYEYVSNGSLASLLFNAGQLNKLVKEDEEGVDWMILERMVKVGLWCVQDDPPLRPSIKNVILTLEGLKDIPIPPSPAHLAK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1036 661 SUPERFAMILY alpha-D-mannose-specific plant lectins 165 264 IPR036426 -
Ssu6g1036 661 ProSiteProfiles Protein kinase domain profile. 508 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1036 661 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 209 IPR036426 -
Ssu6g1036 661 Pfam D-mannose binding lectin 73 158 IPR001480 -
Ssu6g1036 661 SMART tyrkin_6 510 644 IPR020635 GO:0004713|GO:0006468
Ssu6g1036 661 ProSiteProfiles Bulb-type lectin domain profile. 22 144 IPR001480 -
Ssu6g1036 661 ProSitePatterns Protein kinases ATP-binding region signature. 514 537 IPR017441 GO:0005524
Ssu6g1036 661 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 595 659 - -
Ssu6g1036 661 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 9 596 - -
Ssu6g1036 661 Gene3D - 22 146 IPR036426 -
Ssu6g1036 661 Gene3D - 147 292 - -
Ssu6g1036 661 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 595 659 - -
Ssu6g1036 661 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 596 - -
Ssu6g1036 661 Pfam Protein kinase domain 511 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1036 661 Pfam S-locus glycoprotein domain 245 317 IPR000858 GO:0048544
Ssu6g1036 661 SUPERFAMILY Protein kinase-like (PK-like) 478 599 IPR011009 -
Ssu6g1036 661 SMART blect_4 31 147 IPR001480 -
Ssu6g1036 661 Gene3D Phosphorylase Kinase; domain 1 472 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1036 Ssu-Chr6 16952122 16954506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1036 481 613 Trihelix Transcription Factor Family AT1G26150 42.222 3.84e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu6g1036 Pkinase 2.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1036 - - cam:101496142 657.136