Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1035 ATGGCCTTCATACCCGTTCTGCTGTCACTGTTGTTCATGTTATTTGCAAAAGAAGGCACAGGTACAGGTGAAAGAAGAATTGAGTTGGGGTCTCGGCTCTCTCCTGAAGGCAGTCACAGTCATAATTCATGGGCATCAAGTTCTGGCCATTTTGCTTTTGGCTTTTACCCACAAGGTAATGGCTTTGCTGTTGGAATATGGCTGGTTAGTGGTAGTCCACCTGAAAAAACTATTGTCTGGACTGCTAACCGGGATAGCCCCCAACTCTCCGCTAATTCCACGTTGAACTTGACCAAGACTGGCCTGCGGCTTTTCCCAAGTGGGAGGGAAGGCCAATATCTCATTTCGAATTTTACAGCAATAACTTCGGCTTCTATGCTTGATTCTGGAAACTTTGTGCTCTATGTTGATAACGATACTGTTGCCTGGCAAAGCTTTGATGAACCAACTGACACCATATTAGGAGGTCAGAGTTTAAGTACCAGTGGCAAGCTGGTTTCTAGCGTGTCCAAATCAGACCATTCGAGTGGACGTTTCTTTCTCATCATGCAAGATGATGGAAACCTCGTTGCTTACCCAATGAACAGCCCATCAACTGCCGCTGATGCTTACTGGGCTTCAAACTGGGCTTCAATTACCTGGACTGATTTTCAAAAGCTCAGTCTTAACGTCTCGGGCTTTCTTTGCCTTAGTGGAGCTAGTAGTCTTCTGTGTCTTAACAATAGCATCAGCTCAGGAAAGAAATCACACAACACAAGTTCAATCTACCGTGCAACACTTGATGTAGACGGGAACTTGAGATTGTATGAGCACCAATTTGAGGGCAACGGCAGCTCACATGTCCAACTATTGTGGAGCACCTCGCTTGAGAAATGTCAAATCAAGGGGGTTTGTGGCTTTAACAGTTTTTGCTCAAACGTAACAGGGGATGCCGTGTGTGAGTGTTTTCCTGGTTTCGTCCCCTCCAAAAGCAAGGGTAACGGTAACGTGTCTCTGCCTCTGGACTGCGTACTGGCCCATAGCAAAGATGGTTGTCAAAGCAGTGAAGACCCAACGATTTTGTATAACATTACTCAGTTGGAGAATATGTTTTGGGATGATAGTGTTACTCCATATTCTGTCATACCGATGAAGAAGGAGGAGTGCGAGAAGTCTTTCCTGGAAGATTGTGATTGCATGGCAGTATTATATTCTGACGGCAACTGCAAAAAATACAGACTCCCGTTAACATATGGCAGAAGGGTTCAAGATGCATTGACCGTGGCCTTTTTAAAAATGCCTTCGGGAATTGTCGCAAGTCCAACTACAAATAACTCCACACAGAAGCCTAGGATCGTAGTGGATAACAAGAGAAGACTTATAATGATTCTAGCCTTTACTTTGGGTTTCATTTCATTGTTATCTTTGGTATTTGCGGTGTTCATTTTCTTCACTTATAAGCGGCAAGTTTATAGGTACACAACGTTGTCTACAAGTGAGAATCTGGGATTTACTGAAGAATGTTCTTTGCGTTCATTTTCTTTCGATGAACTTGAGAAATCGACAGGAGGCTTCACGGAAGAGATAGGCAGAGGATCATTTGGAGCGGTTTATAGAGGCACAACAGGTGATAGTAACAGAAGTATTGCTGTCAAGAGGCTGGAGAGAATTGCCGATGAAGGGGAGAGGGAATTTCGAGCTGAAGTTACTGCCATTGCTCGAACACATCATAGGAACTTGGTTAAGCTCATTGGTTTTTGCATCAATGGATCTAGGAAGCTTCTTGTTTATGAATATGTCAGTAACGGGTCTTTGGCAAATCTTCTCTTCAATGAGGAGAAGCACATATCTTGgagagaaagactaaaaatcGCATTGGACGTTGCTAGAGGAGTCCTGTATCTACATGAAGAGTGTGAAGTCCGTATTATCCATTGCAATATAAGTCCTCGAAATATACTCATGGATGAAGCGTGGACTGCAAAGATCTCTGATTTTGGATTGGCAAGGCTACTGAAGCCGGACCATTCAAGAATGAAAAAAGAGGATGATGAGACAAGTAAGTACTTGGCACCTGAATGGCAGAAGGATGCACCAGTATCAGTAAAATTTGACATTTACAGTTTTGGAATGGTACTGTTGGAGATTGTGTGCCGCAGAAGCAGCATAGAAATAGATGTTGCCTCAGCAGAGGAGATACTTCTTTCCAGCTGGGTATACCAGTGTTTTGCAGCAGGGCAGTTAAATAAGCTTgttaaagaagatgaagaaggtgTAGAGTGGATGATATTGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACGATCCGCCTCTTCGTCCTTCAATCAAGAATGTCATTTTGATGTTGGAAGGATTGAAAGATATTCCAATTCCTCCCTCTCCAGCCCACCTCgctagataa 2409 0.4288 MAFIPVLLSLLFMLFAKEGTGTGERRIELGSRLSPEGSHSHNSWASSSGHFAFGFYPQGNGFAVGIWLVSGSPPEKTIVWTANRDSPQLSANSTLNLTKTGLRLFPSGREGQYLISNFTAITSASMLDSGNFVLYVDNDTVAWQSFDEPTDTILGGQSLSTSGKLVSSVSKSDHSSGRFFLIMQDDGNLVAYPMNSPSTAADAYWASNWASITWTDFQKLSLNVSGFLCLSGASSLLCLNNSISSGKKSHNTSSIYRATLDVDGNLRLYEHQFEGNGSSHVQLLWSTSLEKCQIKGVCGFNSFCSNVTGDAVCECFPGFVPSKSKGNGNVSLPLDCVLAHSKDGCQSSEDPTILYNITQLENMFWDDSVTPYSVIPMKKEECEKSFLEDCDCMAVLYSDGNCKKYRLPLTYGRRVQDALTVAFLKMPSGIVASPTTNNSTQKPRIVVDNKRRLIMILAFTLGFISLLSLVFAVFIFFTYKRQVYRYTTLSTSENLGFTEECSLRSFSFDELEKSTGGFTEEIGRGSFGAVYRGTTGDSNRSIAVKRLERIADEGEREFRAEVTAIARTHHRNLVKLIGFCINGSRKLLVYEYVSNGSLANLLFNEEKHISWRERLKIALDVARGVLYLHEECEVRIIHCNISPRNILMDEAWTAKISDFGLARLLKPDHSRMKKEDDETSKYLAPEWQKDAPVSVKFDIYSFGMVLLEIVCRRSSIEIDVASAEEILLSSWVYQCFAAGQLNKLVKEDEEGVEWMILERMVKVGLWCVQDDPPLRPSIKNVILMLEGLKDIPIPPSPAHLAR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1035 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 175 271 IPR036426 -
Ssu6g1035 802 ProSiteProfiles Bulb-type lectin domain profile. 150 281 IPR001480 -
Ssu6g1035 802 Gene3D - 150 290 IPR036426 -
Ssu6g1035 802 ProSiteProfiles Protein kinase domain profile. 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g1035 802 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 6 800 - -
Ssu6g1035 802 SUPERFAMILY Protein kinase-like (PK-like) 498 786 IPR011009 -
Ssu6g1035 802 SMART blect_4 31 149 IPR001480 -
Ssu6g1035 802 Gene3D Phosphorylase Kinase; domain 1 480 592 - -
Ssu6g1035 802 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 800 - -
Ssu6g1035 802 Pfam D-mannose binding lectin 77 162 IPR001480 -
Ssu6g1035 802 ProSiteProfiles Bulb-type lectin domain profile. 30 147 IPR001480 -
Ssu6g1035 802 Gene3D Transferase(Phosphotransferase) domain 1 593 794 - -
Ssu6g1035 802 Gene3D - 29 147 IPR036426 -
Ssu6g1035 802 Pfam Protein tyrosine and serine/threonine kinase 518 781 IPR001245 GO:0004672|GO:0006468
Ssu6g1035 802 CDD EGF 292 324 - -
Ssu6g1035 802 Pfam S-locus glycoprotein domain 248 322 IPR000858 GO:0048544
Ssu6g1035 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 209 IPR036426 -
Ssu6g1035 802 ProSitePatterns Protein kinases ATP-binding region signature. 522 545 IPR017441 GO:0005524
Ssu6g1035 802 PIRSF SRK 1 802 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1035 Ssu-Chr6 16920783 16923191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1035 427 797 Receptor kinase-like Gene Family AT4G18250 37.173 1.91e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu6g1035 PK_Tyr_Ser-Thr 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1035 - - cam:101496142 972.615