Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1009 ATGGCTCAAATAAGGAATGTGGCAATTCTTGTCGTAGTCGTTGCGGTTGCAGTGTTACTACGGAGCACAGAAGCTAAAGATTACGAGGTGGGAGGAAGTGTCACAGGTTGGACTAGTTTTCCTCCAGGCGGTGCTTCTTTCTATTCCAAATGGGCAGCAAATTTTACGTTCAAAGTAAACGACACTCTAGTCTTCAACTTCGAATCTGGAAGCCACAGTGTGGTGGAACTTACCAAGGCTAACTACGAAAAGTGTGAAGTCAATAACAATATCAAAGCCTTTAATATAGGACCAGCTCGAATCCCCCTCGATCGCACAGGGGAATTCTACTTTTCCTGCACCTTCTCGGGCCATTGCACCAGTGGCCAAAAGCTAAGCATTAAAGTCACTGATTCTTCATCCCCAGCACCACAGAAAGCTCCAGCTAAAGGTCCTTCAACTTCTCCTCCTGCGCCACAGAAAGCTCCAGCTGAAGGTCCTTCAGCTTCTCCTCCTGCATCTGGTTCAGTTTCCAATGAAGGAGCCCCATCATCCCAAACTGAGCCAGCTGCTATAGCCCCTCCACCAAAGGGCTCAGCCACACCTCTGGCTGCTACCTTCTCTCTATTACTCATCACCACTGCCATCACTTTTTTGTCTCAATTTTAG 648 0.4769 MAQIRNVAILVVVVAVAVLLRSTEAKDYEVGGSVTGWTSFPPGGASFYSKWAANFTFKVNDTLVFNFESGSHSVVELTKANYEKCEVNNNIKAFNIGPARIPLDRTGEFYFSCTFSGHCTSGQKLSIKVTDSSSPAPQKAPAKGPSTSPPAPQKAPAEGPSASPPASGSVSNEGAPSSQTEPAAIAPPPKGSATPLAATFSLLLITTAITFLSQF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1009 215 MobiDBLite consensus disorder prediction 142 159 - -
Ssu6g1009 215 CDD Stellacyanin 26 129 - -
Ssu6g1009 215 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
Ssu6g1009 215 MobiDBLite consensus disorder prediction 128 192 - -
Ssu6g1009 215 MobiDBLite consensus disorder prediction 164 179 - -
Ssu6g1009 215 ProSiteProfiles Phytocyanin domain profile. 26 131 IPR003245 GO:0009055
Ssu6g1009 215 Gene3D - 25 142 IPR008972 -
Ssu6g1009 215 PANTHER BLUE COPPER PROTEIN 2 203 IPR039391 GO:0009055
Ssu6g1009 215 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Ssu6g1009 215 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1009 Ssu-Chr6 16434698 16435587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g1009 11 175 Phytocyanin Superfamily AT2G25060 35.758 1.41e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1009 - - gsj:114392869 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1009 6 16434698 16435587 Ssu6g1009 6 16434698 16435587 ECH