Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0958 ATGGGAGCAGTGATTCTCCCAGATCTCGGAACCGAGATTTTGATTCCCGTGTGCGCCATCATCGGAATCGGGTTCGCCCTCTTCCAGTGGTTCCTCGTCTCCAAGGTCAAGCTCTCCGCCGCCAGAGATTCCTCTCCCAACGCCGCCGGCAAAAATGGCTACAACGATTACCTAATCGAAGAGGAGGAGGGCATCAACGACCACAACGTCGTCGTCAAATGCGCCGAAATCCAAAACGCCATTTCAGAAGGAGCAACCTCTTTCCTTTTTACTGAATACAAGTATGTGGGAATCTTCATGGTGGCTTTTGCCGTTTTGATATTCCTCTTCCTTGGCTCTGTGGAAGGATTCAGCACGAGCTACCAGCCTTGCACCTATGATCAAACTAAAAGGTGTAAGCCAGCTCTTGCTACTGCTGTTTTCAGCACCATATCTTTCCTGCTTGGTGGTGTTACATCGCTTATTTCTGGATTCCTTGGCATGAAAATTGCTACTTATGCCAATGCAAGAACCACCCTGGAGGCAAGGAAGGGCGTCGGGAAGGCTTTCATTACGGCATTTAGATCTGGTGCAGTTATGGGTTTTCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTGCCATCAACCTGTTCAAGATTTACTATGGTGATGACTGGGGTGGCCTTTTTGAGGCCATCACTGGTTATGGTCTCGGTGGGTCTTCTATGGCTTTGTTCGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCCGATCTTGTTGGCAAGGTTGAAAGAAACATTCCTGAAGATGACCCAAGAAATCCAGCTGTGATTGCTGATAATGTTGGTGATAATGTTGGGGACATAGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAGTCATCCTGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCCTTTGGGGTGAATCATGAGTTCACTGCTATGTTATACCCTCTCATCATCAGTTCTGTGGGTATCCTTGTTTGTTTGCTCACTACCTTGTTTGCAACCGACTTTTTTGAGATCAAGGCCGTAAAGGAGATTGAGCCCGCGTTGAAAAAACAGCTTGTTATTTCCACTGTGCTAATGACCATTGGGATTGCAATTGTTAGTTGGATTGCACTCCCAACTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGACGTCAAGAATTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTATGGGCAGGGCTTATTATCGGATTTGTAACCGAGTATTATACTAGCAATGCATATAGTCCTGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCAACTAATGTTATATTTGGCCTTGCCTTGGGATACAAATCTGTTATTATTCCAATTTTTGCTATTGCAGTTAGTATTTTTGTTAGTTTCAGCTTTGCTGCCATGTATGGTATTGCTGTTGCTGCCCTTGGGATGCTGAGTACCATAGCCACTGGATTGGCGATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGTATGAGTCACAGAATTCGAGAGAGAACTGATGCCCTTGATGCTGCAGGAAACACAACTGCCGCTATTGGGAAGGGCTTTGCAATTGGTTCTGCTGCCCTTGTATCTCTGGCCCTCTTTGGTGCCTTTGTGAGCCGAGCTGCTATTACCACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTGATTGTGGGTGCAATGCTTCCTTACTGGTTTTCTGCCATGACTATGAAGAGTGTGGGCAGTGCTGCTCTGAAGATGGTTGAGGAAGTACGCAGGCAATTCAACACCATTCCAGGATTGATGGAGGGAACTGGTAAGCCTGACTATGCGACATGTGTTAAGATCTCCACTGATGCTTCAATTAAAGAAATGATACCACCTGGTGCTCTTGTCATGCTCACACCCCTTGTCGTTGGAATCCTTTTGGTGTTGAAACACTTTCTGGTGTCCTTGCTGGATCTTTGGTGTCTGATTGCTATCTCCGCATCCAACACCGGTGGTGCTTGGGATAATGCCAAGAAGTACATAgagGCTGGTGCTTCTGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGATTGTCACAAGGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTCAAGGACACATCTGGACCGTCCCTTAACATCCTTATCAAGCTGATGGCTGTTGAGTCTCTCGTGTTTGCTCCCTTCTTTGCTACTCATGGTGGTTTACTCTTCAAGATCTAA 2289 0.4622 MGAVILPDLGTEILIPVCAIIGIGFALFQWFLVSKVKLSAARDSSPNAAGKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAVLIFLFLGSVEGFSTSYQPCTYDQTKRCKPALATAVFSTISFLLGGVTSLISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHEFTAMLYPLIISSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGIAIVSWIALPTSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTGKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILLVLKHFLVSLLDLWCLIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0958 762 Pfam Inorganic H+ pyrophosphatase 43 748 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu6g0958 762 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 762 - -
Ssu6g0958 762 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu6g0958 762 PIRSF H+-PPtase 13 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu6g0958 762 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Ssu6g0958 762 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0958 Ssu-Chr6 15391925 15396018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0958 5 629 Primary Pumps ATPases AT1G15690 87.739 0.0 1120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0958 K23025 - gmx:100775864 1427.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0958 6 15391925 15396018 Ssu6g0958 6 15391925 15396018 ECH