Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0940 ATGCTTCTTGCTGAGGGGGAGGGAGCagtgaggaagaagagaagacccaaaagaggggaagattttaaatttactgAGGCTCTAGTCAAGGCTGATTTCTGGCTACTGTTTTTTGTTTACTTTGTTGGTGTGGGAACTGGGGTTACTGTTCTTAATAATTTGGCCCAAATAGGCATTGCACGAGGTGAGCAAGATACCACTATCTTGCTGTCACTTTTCagctttttcaattttgtggGTCGGCTTGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACGATTCCAAGGACAGTTTGGATGACATGCACGCAGATAATTATGATATTCTTGTACCTTCTGTTTGCCTATGCCATCAATGGAACCCTTTATCCTGCAATCGCAGTTCTTGGTATCTGCTATGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGTTTGAAACACTTCGGTTTATTGAGTAACTTCATGGCTTTGGGGAATCCACTTGGTGCATTACTTTTCTCAGCTCTTCTAGCAGGACATATATATGACAATGAGGCAGCAAAGCAGCATGTTGTAGGCCTCACTGCTTCAAGTGTTTCATGCATGGGTCCAAATTGTTTTAAGCTCACCTTTTTGACTCTGGCTGGTGTGTGTGTTGCGGGTACCATCTCCAGCATCATCTTGACTATAAGAATTAAGCCAGTTTATCAAATGCTTTATTCCGGGGGTTCTTTTAAGCTACCTCAAACTTCCGTCCACTAA 765 0.3948 MLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIARGEQDTTILLSLFSFFNFVGRLGGGVVSEHFVRTKTIPRTVWMTCTQIIMIFLYLLFAYAINGTLYPAIAVLGICYGVQFSIVIPTVSELFGLKHFGLLSNFMALGNPLGALLFSALLAGHIYDNEAAKQHVVGLTASSVSCMGPNCFKLTFLTLAGVCVAGTISSIILTIRIKPVYQMLYSGGSFKLPQTSVH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0940 254 SUPERFAMILY MFS general substrate transporter 14 235 IPR036259 -
Ssu6g0940 254 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 252 - -
Ssu6g0940 254 Gene3D MFS general substrate transporter like domains 29 237 IPR036259 -
Ssu6g0940 254 PANTHER NODULIN-LIKE/MFS TRANSPORTER 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0940 Ssu-Chr6 15210271 15211426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0940 1 254 Nodulin-like Gene Family AT1G80530 63.529 5.93e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0940 - - gmx:100787328 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0940 6 15210271 15211426 Ssu6g0940 6 15210271 15211426 ECH
Ssu6g0940 6 15210271 15211426 Ssu1g1766 1 43864177 43867642 PCT