Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0939 ATGTTACGAGTGAAGGGAGGGAAAAGGCCACCTTGGGTGGGACTTGGAGCTGCCGTGTGGGTTCAGATTGCTTCAGGAAATGGCTACACTTTCCCTCTCTATTCCCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAAATTACCCTGCTTGGTGTTGCCAATGATATTGGTGAGAATGTCGGCATTCTTCCCGGTCTTGCCTGCAACAAGTTCCCTCCTTGGCTCATTCTTTTCATCGGTGCTCTCTTATCTTTCCTTGGTTTCGGTGTTCTCTGGCTTGCTATCACTAAAACACTTGACTCCATTCCTTTCTTCTTGCTATGGTTTGCACTCGCTGTTGCTACCAACAGTTGTGCATGGTTATCTACTGCTATTCTTGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGGATACTGAAAGGTTATTCGGGTCTCAGTGCTGCAGTTTTTACTGAAATTTACAGCATAGTTTTTCACAATTCTTCATCCAAGTTCCTGTTGTTTCTTGCCATTGGTATTCCTGCTTTTTGCTTCAGTACCATGTTTCTTGTTAGGCCTTGTACTCCAGCTTCTGGTGAAGATTCTGCTGAAAAGGggcattttctttttatccaagGTGCTAGCGTGGCCTTGGGTTTATACATACTTGCAAGAACAATACTAGACAACTTTGTCCTCATGAGTGATACAGTGTCATATGTTTTGTTGGCTGTGATGATTCTCCTTCTCTTGGCTCCACTTGCTATCCCTATAAAGATGACACTTTGTCCCAGACAAGCCTCTTCAGCAGAAACGTCTGATCAACATGTTGGATCTTCGGATTTTCTGATTCAAGATGGTAAAGTGGACAACGTAGAGCCCTTGCTATCAGTCTTCATCAGCTAG 906 0.4338 MLRVKGGKRPPWVGLGAAVWVQIASGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILFIGALLSFLGFGVLWLAITKTLDSIPFFLLWFALAVATNSCAWLSTAILVTNMRNFPVSRGTVAGILKGYSGLSAAVFTEIYSIVFHNSSSKFLLFLAIGIPAFCFSTMFLVRPCTPASGEDSAEKGHFLFIQGASVALGLYILARTILDNFVLMSDTVSYVLLAVMILLLLAPLAIPIKMTLCPRQASSAETSDQHVGSSDFLIQDGKVDNVEPLLSVFIS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0939 301 Pfam Nodulin-like 11 258 IPR010658 -
Ssu6g0939 301 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 297 - -
Ssu6g0939 301 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 297 - -
Ssu6g0939 301 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0939 Ssu-Chr6 15208982 15210224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0939 2 297 Nodulin-like Gene Family AT1G80530 53.716 1.24e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0939 - - gmx:100808992 531.176