Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0935 ATGATCATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAGGTTCTTCGTAGGGTGCTCTTACCATGAGAACGCGAAAAAGAATGAGAAGAATGTCTGCTGCTTGGATTGTTGCACCAGTATTTGTCCTCACTGCTTGCCATCTCATCGCTTCCACAGGCTTCTTCAGGTTCGCCGCTACGTTTATCATGATGTTGTTAGGTTGGAAGATCTTCAGAAACTCATAGACTGCTCCAACGTTcagGCCTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGGTCAGGAAACTACTGCACCTCCTGTGATAGAAGTCTCCAAGAGCCTTTTATCCACTGCTCTCTTGGATGCAagGTTGATTTTGTGCTGAAACACTATAAGGACCTCTCTCCCTTCTTGAGGACATGCAACTCCCTACAACTAAGCCCTGACTTCCTGATCCCACAAGACATGGGGGATGAGGAGATGACTCGTTCAACCGTTGTGGATTGTGATGAGCCAATGAGCTCATCTTCGGGGTCATCAGGGTCAGAGAATAACATGAGCATGGCTTGCACAGAGATTGTTAGGAAGAGGAGAAGTGGATGGAGCACTGTGTGTGCAAAATTTATGGCCAATAGCAATAAGGTTTCGGATGAAGACATGGCCACCAGCATGAGTAGAAGAAAAGGCATCCCTCATAGAGCCCCTCTGTGTTAG 741 0.4629 MIMGYQKPAWLEALYTQRFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPFLRTCNSLQLSPDFLIPQDMGDEEMTRSTVVDCDEPMSSSSGSSGSENNMSMACTEIVRKRRSGWSTVCAKFMANSNKVSDEDMATSMSRRKGIPHRAPLC 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0935 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 246 - -
Ssu6g0935 246 Pfam PLATZ transcription factor 62 133 IPR006734 -
Ssu6g0935 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0935 Ssu-Chr6 15088320 15089740 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ssu6g0935 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0935 - - gmx:100785737 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0935 6 15088320 15089740 Ssu6g0935 6 15088320 15089740 ECH