Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0921 aTGGCGTTTGATCGAAATTCTGTTCCGATGGATCTTCGTCCATTGAACCTAGCCGCGGCGGTGGCGGAGGAGCCGCTGATTTCGCCGGCCACCGCCACGCCGCCGACGCCCAATTCAGTCGGCGAACTTTTCTATACGCCATCGGCCACCACCGCCGCCGCCTCAACGTGGTGCGTCCGGCCCATTGCGCATCCCAACGTGAACCCTGCGGCGTTTGGGTTTAACTACGGCGGTTCCAGTTATGGCAATCGCGTTGTGGCTGGGAATGCTTTGAATTTGGGGAAGTTTATAGGGTGTAATGGATTGGACAAGGCCTGCAATGATGTGAATGGTTTTGGTTATGGTGTCGGTGGTGTTCGGGGCAGCAGAGTGGCCGGGAATGGCGGTGATCACGGCCGCGATGAGGGCGGAGGTGGGGACGATTCGGCATCGGGGAGGAAGGTGAAGTTTTTGTGCAGTTTTGGCGGGAGGATATTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAAAGATGTGAGTTTCAATGATTTGGTGCAGAAGATGGTTGACATTTATGGGCAGGCTGTGGTTATCAAGTACCAGCTCCCTGAGGAGGATCTTGATGCCTTGGTGTCTGTGTCGTGTCCTGATGATATGGAGAATATGATGGAGGAGTATGAGAAATTGGTTGAGAGGTCTCCTGATGGTTCTGCTAAGCTGAGGGTTTTTCTGTTTTCGGTTTCGGAGAGTGAAGTTTCTGGTGGGGTGCAGTTTGGGGACTTGCAGGATACTGGGCAGAAATATTTTGATGCTGTGAATGGGATTGGTGTTACAGAGGGGATTGGGGTTGCTGGTGGGATCAATAGGAAGGAAAGTGTTACAAGTGCTGCTTCAACCCAGAATTCGGATTTGAGTGGGGCTGAGACTCTTGACAGTTTGATTACTGGTCAAGGGGATGTCAGTGTGGTGCCCTTGTCATCACCTAAGGAGAATGTGGTGGCATCTTCTTCAGACACAAGAGCAAATTTGGTGGTTTCAGAGGCCAGTGCACCAGTTTACTCGTGCACTTCTGCGGTTTCGTTGGCCATGCCTGTGTCTAAGACTAGTCCAACCCCAACCCACAGTCTTTATTTTCAGAGTGAGGTTGAATTAGAAAAGTCTGTGCCTGTTACTTTATCCCAGCAGCTATTTGGATTGCAGCAATCTGGAACAGAAATTCCAACCCCTTCATCTTATTTGCAGCATTTTGTTGATCCGGGCCAGGAGGTTATGAACCATGCAGATTATGTCCAGCTGCCTTCCCAGATGGGGTTCAAAAACACTCAACTTTTTGGAAAGACTGTGCCTGTCTTCACTCAACAGCAGTTTCATGATAATACTCCTGGTTTAGCATTCCATCAGGCCATCCCTGGGGTACCAATGACGGTGACTCAACCATCTTCTCACGTTGGTGTAAGACCGAATGTTATTCAACCACAACCATTGGTGCAACCACAGCAACATCTTTTGGATCAATACAATGATGAAAATACATCAGGGATAAGGATTATCCAGCTTCCTGCCGAACGTAGCTACAACGCATACCGGGTTCCAGTGAATCAAGTCCCATCTGTCCTAGTTGGAGGCAATTATGGCTGGCTTCCGGTTCCTCCACAAGAGCGGGTTGTTATCTCTGATGGATTATTACCTCAACAGCAGGTAATGATCCCTGAGAAAATCCGAAGAGCCGAGGACTGTTCTATGTGTCAGACAAAACTACCTCATGCACATTCAGAGCCAGTAGTTCAGAATCAGCGTAATAGTGGTTCAGGTCCTATTCCTGATTCAACCCCAACTCACCATAGTTTTCCAATGGACGACAACATGAAAGATCAAGCAGCAAATAGGATTATGCCAATGGTGACTGCACCCTTGAAGGAAGGCATTGCTGAACAAGGGGCTGGGACCAGACCCAGGGTCGTTGGCAAATTGGAACCTCCTGGTGGAGTACATCATATTGAGACAACTGGGCTTTCTCATAATATTGAGCCGCAGCCTGAAGGTGGGAGGATTTTTATACAAAAGCCAGAAGAATTTGATCATCCCAGGAATTCATTTTTCCAGGAAAAGATTGGAAGGAAAGGTGGAAAACAATCTCCAAATGATGAGCTCATGGGAACAGCACCACTGTCTTATCTAGATGATGTTGTTGACCAGCACATGGTACCAGTTGAAAACTGGGTTAAACAGGATGTTCTTATTAACAAACCTGTCAATAATGATATTCCTATAGTTGATGGAACATCTATACAAACTTCAGAGTGTATGGTTCAAGCATCTCCAAAAGAATATACTAATGAGCTTACTGTGGTTGTTTCTAAATCAGATGCCATAGATAATTGGATTAGACAAGATCAACTAAATCCTATTGATGGAAGGATGGACACCTTCAAGATATGTAATTCTGAAGTTTACGTAAGTAATGATTACTCTTTTCTGCCAGTTGATAAACCCAGTGGGAATGATAAATTAGATTACAACACTCAGTACTCTGTAGAGGAAGAGGTGATTCTGGACAACAACTTTGGCAGGTCAAAATTGATAGTTGATGCGAATCAAAATAAGATGACAGGTGTGATTCCTTGTTCTTCGATGGAAGTTTCATATGGGCACAATTCCAGGCCAGGGGAATGCAATGAGGCTGCACAACCCCCTGTTTGGGGCATTCCTGGCTCAAATCCTCAACAGAAGATTGGAAACCTCCACAGGGATGATGCAGTACCATCTTCATCGTCCCCATCTGTCAGGTTTGGAGAGGTGCAGGATACTCCGAACTCACTTTTCAGCAATCAGGATCCCTGGAATATACAGCATGGTACCTTCTTTCCACCTGCTAGACCTAGCAAAGCTCCATTGAAAAAAGAAACCTATTCTCATAAGGATCACGTTGGTGAGAATCCAGGCAACTTTGGGGAACAAAGTTTAGCACAGTTGGGTGATACCATCTACGAgtcattcaaacaaaatttaactttaGAACATGGTCGGTCTGCCAAAGGTTCAGCAGAAGACCAACAACTTCAAGCTGTTGCAGAAGATGTAGCAGCTTCTGTTCTACACTCAAGAACTCCTTCAAATTCTGACTTGTATTCCAGAGATGTTTCCTGTCCTGAAAACATTGAGGATGGCcgtgttcaaaataatttaatagatgTGGAGTGTAAACATAAAGCTCAGgATGTCAAGAGCAAGCAACTAGAAAAGACAAATTTTGGCTTTCCAGCATCGGGTGTTGGAAAATTACAGGTTATAAAGAATTGTGATCTTGAAGAACTGACAGAACTGGGTTCTGGTACCTTTGGGACCGTATATCATGGAAAATGGAGGGGCACGGATGTTGCAATCAAGCGGATTACTGATAGATGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAAATGACTTCTGGAATGAGGCAATCAAACTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTACGGTGTGGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACCGAGTATATGGTTAATGGTTCTTTAAGAAATGCCTTGCAGAAGAGTGAGAGGAATCTTGACAAGTGCAAGCGTCTTTTGATTGCAATGGACGTGGCATTTGGCATGGAGTACTTGCATGGAAAAAACATTGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGCGACTTGGGTCTGTCCAAAGTAAAGTGTCAGACACTGATCTCTGGTGGTGTGAGAGGAACTCTACCGTGGATGGCTCCAGAACTGCTGAACGGAAGCAGTAGTCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTGATGTGGGAACTCTTGACTGGAGAGGAGCCATACGCTGAGTTGCACTATGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCTGTTCCCGAACTTTGTGATCCAGAATGGAGATTGTTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAGAGACCTACCTTCCCTGAAATTGCCAATGAATTACGTTCTATAGCGGCCAAGATCTCTCCCAAAGGACAAAACTCTCCTAAAGGACAAAACCAACTGCTGCAACCCTCTTCATTGCAGACTCAAGTCCACAAATGA 4209 0.4555 MAFDRNSVPMDLRPLNLAAAVAEEPLISPATATPPTPNSVGELFYTPSATTAAASTWCVRPIAHPNVNPAAFGFNYGGSSYGNRVVAGNALNLGKFIGCNGLDKACNDVNGFGYGVGGVRGSRVAGNGGDHGRDEGGGGDDSASGRKVKFLCSFGGRILPRPSDGMLRYVGGQTRIISVRKDVSFNDLVQKMVDIYGQAVVIKYQLPEEDLDALVSVSCPDDMENMMEEYEKLVERSPDGSAKLRVFLFSVSESEVSGGVQFGDLQDTGQKYFDAVNGIGVTEGIGVAGGINRKESVTSAASTQNSDLSGAETLDSLITGQGDVSVVPLSSPKENVVASSSDTRANLVVSEASAPVYSCTSAVSLAMPVSKTSPTPTHSLYFQSEVELEKSVPVTLSQQLFGLQQSGTEIPTPSSYLQHFVDPGQEVMNHADYVQLPSQMGFKNTQLFGKTVPVFTQQQFHDNTPGLAFHQAIPGVPMTVTQPSSHVGVRPNVIQPQPLVQPQQHLLDQYNDENTSGIRIIQLPAERSYNAYRVPVNQVPSVLVGGNYGWLPVPPQERVVISDGLLPQQQVMIPEKIRRAEDCSMCQTKLPHAHSEPVVQNQRNSGSGPIPDSTPTHHSFPMDDNMKDQAANRIMPMVTAPLKEGIAEQGAGTRPRVVGKLEPPGGVHHIETTGLSHNIEPQPEGGRIFIQKPEEFDHPRNSFFQEKIGRKGGKQSPNDELMGTAPLSYLDDVVDQHMVPVENWVKQDVLINKPVNNDIPIVDGTSIQTSECMVQASPKEYTNELTVVVSKSDAIDNWIRQDQLNPIDGRMDTFKICNSEVYVSNDYSFLPVDKPSGNDKLDYNTQYSVEEEVILDNNFGRSKLIVDANQNKMTGVIPCSSMEVSYGHNSRPGECNEAAQPPVWGIPGSNPQQKIGNLHRDDAVPSSSSPSVRFGEVQDTPNSLFSNQDPWNIQHGTFFPPARPSKAPLKKETYSHKDHVGENPGNFGEQSLAQLGDTIYESFKQNLTLEHGRSAKGSAEDQQLQAVAEDVAASVLHSRTPSNSDLYSRDVSCPENIEDGRVQNNLIDVECKHKAQDVKSKQLEKTNFGFPASGVGKLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRNDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKSERNLDKCKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYAELHYGAIIGGIVSNTLRPPVPELCDPEWRLLMERCWSSEPSERPTFPEIANELRSIAAKISPKGQNSPKGQNQLLQPSSLQTQVHK 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0921 1402 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 112 919 - -
Ssu6g0921 1402 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 931 1376 - -
Ssu6g0921 1402 Pfam PB1 domain 167 250 IPR000270 GO:0005515
Ssu6g0921 1402 PANTHER SERINE-THREONINE PROTEIN KINASE 112 919 - -
Ssu6g0921 1402 PANTHER SERINE-THREONINE PROTEIN KINASE 931 1376 - -
Ssu6g0921 1402 SMART PB1_new 162 251 IPR000270 GO:0005515
Ssu6g0921 1402 MobiDBLite consensus disorder prediction 594 620 - -
Ssu6g0921 1402 MobiDBLite consensus disorder prediction 127 142 - -
Ssu6g0921 1402 SMART serkin_6 1106 1372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g0921 1402 Gene3D - 168 251 - -
Ssu6g0921 1402 SUPERFAMILY Protein kinase-like (PK-like) 1099 1368 IPR011009 -
Ssu6g0921 1402 MobiDBLite consensus disorder prediction 1376 1402 - -
Ssu6g0921 1402 Coils Coil 1193 1213 - -
Ssu6g0921 1402 CDD STKc_MAP3K-like 1112 1369 - -
Ssu6g0921 1402 SUPERFAMILY CAD & PB1 domains 163 254 - -
Ssu6g0921 1402 PRINTS Tyrosine kinase catalytic domain signature 1225 1243 IPR001245 GO:0004672|GO:0006468
Ssu6g0921 1402 PRINTS Tyrosine kinase catalytic domain signature 1296 1318 IPR001245 GO:0004672|GO:0006468
Ssu6g0921 1402 PRINTS Tyrosine kinase catalytic domain signature 1188 1201 IPR001245 GO:0004672|GO:0006468
Ssu6g0921 1402 PRINTS Tyrosine kinase catalytic domain signature 1340 1362 IPR001245 GO:0004672|GO:0006468
Ssu6g0921 1402 Pfam Protein tyrosine and serine/threonine kinase 1109 1369 IPR001245 GO:0004672|GO:0006468
Ssu6g0921 1402 Gene3D Transferase(Phosphotransferase) domain 1 1194 1402 - -
Ssu6g0921 1402 ProSitePatterns Protein kinases ATP-binding region signature. 1112 1143 IPR017441 GO:0005524
Ssu6g0921 1402 MobiDBLite consensus disorder prediction 123 143 - -
Ssu6g0921 1402 ProSiteProfiles Protein kinase domain profile. 1106 1372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu6g0921 1402 MobiDBLite consensus disorder prediction 592 620 - -
Ssu6g0921 1402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1231 1243 IPR008271 GO:0004672|GO:0006468
Ssu6g0921 1402 CDD PB1_UP2 151 249 - -
Ssu6g0921 1402 Gene3D Phosphorylase Kinase; domain 1 1099 1193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0921 Ssu-Chr6 14893982 14902419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0921 97 634 MAP Kinase Kinase Kinase AT3G46920 37.843 1.20e-84 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ssu6g0921 PK_Tyr_Ser-Thr 1.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0921 - - gmx:100819234 2050.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0921 6 14893982 14902419 Ssu6g0921 6 14893982 14902419 ECH
Ssu6g0921 6 14893982 14902419 Ssu1g1785 1 44628396 44634513 PCT