Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0916 ATGGGGGGTGGAAACAGACGATCGAAAGGAAGAGGAAGATCCAACAACAGCAATGGCAGCGCCGCAAGCAACCCTAAATCCCGGAAAAGAGGGTCAGATGTGAAAGCTGCATTCTTCGTCGAAGGGGGTTTCTTGTCTGATTGGCATCTCCTCTCCCCCACCCCCAATCCAGGGAGAAGTTCTGGGTCCAATAACAAATCCGGGAGCCAACGTAGAGCAGAAGACTCTGCGTCTAAAAGTGGGTTTGCAAAATCTTCGGGGGCTACTATTGGATACAGTTATCCTTCACTTGATGTTCAGGAGGTCACATGTGCTGGGACTCGGAACAACAGTGAAGATAGTAATTTAAATCAGCTGCAACCTTCTGTTTTGGCAGACTCCAAGCAGAGTCAAATTATTGGTCATATAGACCAAACACCTCCTTCAAAACCCAACAACGTGAAATATACTTACAGTTATGATGCAGATTTTGTTTTGGGTGACAGCTCTCATAGAGGATTAGGTTTCCCTGCTGAACAAGACAAAACTCCAAGTGGCATTGGCACTTCGCCCGAACAGATGCCCCAGTCAACTCCAGTTTTAGATTCATCATCATTTGAGAAGGATGCTGGTTCTGATGAAGATATGGATTGTGAGTTAAGCAATCAGAAGACAGAAGACTTGCCATCAAATGTGTCTGCTGGAAGAAATTCAGGGTTTCTGTCTATTGGAGGTCTTAAATTATACACTCAGGACATCTCAGATAATGAAAGTGAAGAAGATAATGATGAAGACTCAGCAGATGAGGACAGCTCTGCATCTTCCGAGCCAGAAGAATCACTCGGATCATCTGAAAGCAATGATTCTGAAGACACATCTGACAGTGATTCAGACATCGATGAAGAGGTTGCAGAAGATTATTTGGAAGGAGTTGGTGGTAGTGATAACATCATGGATGCAAAATGGTTGCTAAAACCTGTTTTGGATGAGTCAGATGAAGATAGTTCTTCTAGTAGTCGCTATGACGAGGCTTTGGAGAAGTTGGGTGGCTTTGCCCTTGAAGAAGCCTCCAGGGAATATGGCATGAAGAAAGCTCAACCACAGAGGAAACACTCTGTAGATTCTGGTTCTTTAGCTTTGGAAGACTTAATGCTGGAAAAAGATCCAAGAACCATCTCTGCTAGAAAGAAGCATGTTCCTCGGTTCCCTCACTCTTGGCCTTTGCATGCTCAGAAGAGTAAAGCTTCCAAAAAAATTCATGgtgaaaaaaagaaacttcGTAAAGAAAGGATTGCTGTAAAGCGCAGAGAAAGAATGCTGCATCGTGGTGTTGATCTTGAGAAAATTAATTCAAAATTAGAACAAATCGTTTTGGAGGAAGTGGATATGTTCTCTTTTCAGCCTATGCATTCTCGGGATTGTTCACAGATACAACGATTGGCAGCAATTTATCAATTGCGGAGTAATAGCCAAGGCTCTGACAAAAAAAGATTTGTGACAGTGATGCGAACGCAGTTTACATCCATGCCATCTTCAAGTGGGAGACAGCGCCTGGAAAAGTTGTTGGGAGTTGACAACGAGGATGCCGATTTTTCGGTCGCTGAGTATGTGAATAAGAAATCTGTGAGTGGAGACAGAAGACTgggaaagaaaaatgctaaaaggAATGATTTTAGATTGAAAGAACTTCAATCTGCCCAGAACAAGTACTCAGGCAGCAGTAAAGTGAGGGACAAGAAAGGGAGTGGACAAAAGGGTTCATATGCTAATCAGCCTGTGTCATTTATATCAAGTGGCATAATCCATTCAGAAACTGTACAGGTTACAGCTGCTGATGCTGAAGAGACTTCTAGGAAGGTTGTCGCTAGCTCTGCTAATATAGGTTCATTTGAGGAACACACTACTGGTTTTGGTTCAAAAATGATGGCTAAAATGGGATACATGGAGGGAGGAGGATTGGGGAAAAATGGCCAAGGTATGGCAGAGCCTATTGAGGTTATTCAAAGGCCTAAATCACTTGGTTTGGGTGTAGAATTCTCCAAAAACCCAGCTGCGCTAGCTAGGAACAAATCTTCACGAGTTGGTGCTTTTGAAAAACATACCAAAGGCTTTGGATCGAAGATGATGGCAAAGATGGGCTTCATTGAAGGCACGGGATTAGGTAGAGAATCACAAGGCATTACTACTCCGTTGACCGCTGTGAGGCTACCAAAGTCACGAGGACTAGGTGCTAAAGTTTAA 2220 0.4275 MGGGNRRSKGRGRSNNSNGSAASNPKSRKRGSDVKAAFFVEGGFLSDWHLLSPTPNPGRSSGSNNKSGSQRRAEDSASKSGFAKSSGATIGYSYPSLDVQEVTCAGTRNNSEDSNLNQLQPSVLADSKQSQIIGHIDQTPPSKPNNVKYTYSYDADFVLGDSSHRGLGFPAEQDKTPSGIGTSPEQMPQSTPVLDSSSFEKDAGSDEDMDCELSNQKTEDLPSNVSAGRNSGFLSIGGLKLYTQDISDNESEEDNDEDSADEDSSASSEPEESLGSSESNDSEDTSDSDSDIDEEVAEDYLEGVGGSDNIMDAKWLLKPVLDESDEDSSSSSRYDEALEKLGGFALEEASREYGMKKAQPQRKHSVDSGSLALEDLMLEKDPRTISARKKHVPRFPHSWPLHAQKSKASKKIHGEKKKLRKERIAVKRRERMLHRGVDLEKINSKLEQIVLEEVDMFSFQPMHSRDCSQIQRLAAIYQLRSNSQGSDKKRFVTVMRTQFTSMPSSSGRQRLEKLLGVDNEDADFSVAEYVNKKSVSGDRRLGKKNAKRNDFRLKELQSAQNKYSGSSKVRDKKGSGQKGSYANQPVSFISSGIIHSETVQVTAADAEETSRKVVASSANIGSFEEHTTGFGSKMMAKMGYMEGGGLGKNGQGMAEPIEVIQRPKSLGLGVEFSKNPAALARNKSSRVGAFEKHTKGFGSKMMAKMGFIEGTGLGRESQGITTPLTAVRLPKSRGLGAKV 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0916 739 MobiDBLite consensus disorder prediction 53 92 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 276 301 - -
Ssu6g0916 739 Gene3D - 426 500 IPR036867 GO:0003676
Ssu6g0916 739 PANTHER G-PATCH DOMAIN CONTAINING PROTEIN 1 738 - -
Ssu6g0916 739 SMART G-patch_5 692 738 IPR000467 GO:0003676
Ssu6g0916 739 SMART G-patch_5 625 671 IPR000467 GO:0003676
Ssu6g0916 739 MobiDBLite consensus disorder prediction 248 268 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 537 555 - -
Ssu6g0916 739 Pfam G-patch domain 627 671 IPR000467 GO:0003676
Ssu6g0916 739 Pfam G-patch domain 694 738 IPR000467 GO:0003676
Ssu6g0916 739 MobiDBLite consensus disorder prediction 200 215 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 216 231 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 244 308 - -
Ssu6g0916 739 ProSiteProfiles G-patch domain profile. 627 673 IPR000467 GO:0003676
Ssu6g0916 739 ProSiteProfiles R3H domain profile. 433 498 IPR001374 GO:0003676
Ssu6g0916 739 MobiDBLite consensus disorder prediction 104 128 - -
Ssu6g0916 739 Pfam R3H domain 439 496 IPR001374 GO:0003676
Ssu6g0916 739 PANTHER G-PATCH DOMAIN CONTAINING PROTEIN 1 738 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 9 27 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 176 198 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 537 583 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 164 231 - -
Ssu6g0916 739 ProSiteProfiles G-patch domain profile. 694 739 IPR000467 GO:0003676
Ssu6g0916 739 SUPERFAMILY R3H domain 442 497 IPR036867 GO:0003676
Ssu6g0916 739 MobiDBLite consensus disorder prediction 1 34 - -
Ssu6g0916 739 MobiDBLite consensus disorder prediction 49 92 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0916 593 669 C2H2 Transcription Factor Family AT5G26610 38.961 3.95e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0916 K17569 - gmx:100802615 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0916 6 14820860 14825847 Ssu6g0916 6 14820860 14825847 ECH