Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0863 ATGGCTTTATGTTTACCAAATGCATCTCCATTTTTGGTCATGCTCTCAATGTGGCTCTTAATTTCCTGCTCTGAGGCCAAAGAATATGTGGTTGGAGGCAGTGACAATTCCTGGAAGGTTCCTCTCCCATCACCAGATTCACTCAGCCACTGGTCCAACTCTCACCGATTCAAAATCGGCGATTCTCTTGTTTTTAAATACGACGAGAGAACAGAATCAGTGCATGTAGTGAATGAGACGGACTACGAACGGTGCAACACGGTGGGGCAAGAACACGTGGTGTTCAACGATGGCAACACCAAGGTGTTGCTAACCAAATCTGGACTCAAACACTTCATAAGTGGGAAAAAGAGTCATTGCCAGATGGGGTTAAAGTTGGCTGTGGTTGTCATGTCTAACAACAAAGCCAAAAAGCAGCTTCCTTTACCGTCTCCTTCACCTTCCCCATCACCATCGTCTTCACCTCCTTCACGTTCACCATCCCCATCCCCATCACCTTCACCGCTTCCAAATAATCAAGGTGTTACTCTTAGTTCAGGCGCTGGATTCATCGAAGTTGTGACGTGGTTGGTGGTGATTATGTTATTGGTTTGA 594 0.4613 MALCLPNASPFLVMLSMWLLISCSEAKEYVVGGSDNSWKVPLPSPDSLSHWSNSHRFKIGDSLVFKYDERTESVHVVNETDYERCNTVGQEHVVFNDGNTKVLLTKSGLKHFISGKKSHCQMGLKLAVVVMSNNKAKKQLPLPSPSPSPSPSSSPPSRSPSPSPSPSPLPNNQGVTLSSGAGFIEVVTWLVVIMLLV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0863 197 MobiDBLite consensus disorder prediction 137 173 - -
Ssu6g0863 197 MobiDBLite consensus disorder prediction 142 169 - -
Ssu6g0863 197 PANTHER BLUE COPPER PROTEIN 13 196 IPR039391 GO:0009055
Ssu6g0863 197 Pfam Plastocyanin-like domain 38 123 IPR003245 GO:0009055
Ssu6g0863 197 ProSiteProfiles Phytocyanin domain profile. 27 132 IPR003245 GO:0009055
Ssu6g0863 197 SUPERFAMILY Cupredoxins 26 131 IPR008972 -
Ssu6g0863 197 PANTHER EARLY NODULIN-55-2 13 196 - -
Ssu6g0863 197 Gene3D - 25 136 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0863 Ssu-Chr6 14030489 14031362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0863 24 145 Phytocyanin Superfamily AT5G57920 45.082 2.12e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0863 - - gmx:100784860 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0863 6 14030489 14031362 Ssu6g0863 6 14030489 14031362 ECH