Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0807 ATGCGAAATATCAAGTCAATCAAGCAAGAATTCCTCAAGAAATGGATATGGGGTCTCAGAAAATATAGCTCTCAGAAGAAGAACATGAGCCTGTTGGAGAGAAAGAAAGCCATAAAACTATCAGCAGATTTAGCCATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAGGGCCCTTATTGCCAATGCTGCCAGAGATGACAACAGCAAGGTCCTCACGGCACACGTGTTAGGCTCATCATCAGAGAGGGTAAGGAAAAGCTTCACGAATTATTCTCACAGCACAAGGATCAGAAGCTGCAGAAATATCTTGAGAAGAAACCGTGCAGTCAACAGAACAAAGGATAGGGTGGTGGCGAGTTTCATTGCCAAGAGGCTGGTCCAGAAGAGAACACGGAGGCTCAAGAGTCTCTTACCAGGAGGAGAATTCATGGACGATGTGTCTTTGGTTGAAGAAACCCTAGATTATATAGAATCACTCCGAGCTCAAGTTGAAGTAATGAAATGTTTTGTCACTGCCTCTGAGCTCATGATCCTAAATCCATCGTAA 552 0.4457 MRNIKSIKQEFLKKWIWGLRKYSSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSRALIANAARDDNSKVLTAHVLGSSSERVRKSFTNYSHSTRIRSCRNILRRNRAVNRTKDRVVASFIAKRLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYIESLRAQVEVMKCFVTASELMILNPS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0807 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 174 IPR044660 GO:0006355
Ssu6g0807 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 174 - -
Ssu6g0807 183 CDD bHLH_AtIBH1_like 125 172 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0807 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 44.751 3.82e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0807 - - ccaj:109811886 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0807 6 12906472 12907023 Ssu6g0807 6 12906472 12907023 ECH